Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALM3P0DP25 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALM3P0DP25 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALM3P0DP25 BTBD7P1-201ENST00000447253 1453 ntBASIC18.51■□□□□ 0.55
CALM3P0DP25 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALM3P0DP25 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALM3P0DP25 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CALM3P0DP25 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALM3P0DP25 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALM3P0DP25 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.5■□□□□ 0.55
CALM3P0DP25 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 LINC02199-201ENST00000506655 2702 ntBASIC18.5■□□□□ 0.55
CALM3P0DP25 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CALM3P0DP25 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.5■□□□□ 0.55
CALM3P0DP25 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.5■□□□□ 0.55
CALM3P0DP25 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.5■□□□□ 0.55
CALM3P0DP25 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.5■□□□□ 0.55
CALM3P0DP25 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CALM3P0DP25 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 AC008894.3-201ENST00000624324 3103 ntBASIC18.5■□□□□ 0.55
CALM3P0DP25 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 AC022144.1-201ENST00000602255 1580 ntBASIC18.5■□□□□ 0.55
CALM3P0DP25 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CALM3P0DP25 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
CALM3P0DP25 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALM3P0DP25 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CALM3P0DP25 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CALM3P0DP25 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.49■□□□□ 0.55
CALM3P0DP25 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.49■□□□□ 0.55
CALM3P0DP25 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.49■□□□□ 0.55
CALM3P0DP25 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.49■□□□□ 0.55
CALM3P0DP25 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CALM3P0DP25 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CALM3P0DP25 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CALM3P0DP25 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.49■□□□□ 0.55
CALM3P0DP25 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.49■□□□□ 0.55
CALM3P0DP25 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.49■□□□□ 0.55
CALM3P0DP25 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.49■□□□□ 0.55
CALM3P0DP25 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.49■□□□□ 0.55
CALM3P0DP25 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.49■□□□□ 0.55
CALM3P0DP25 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.49■□□□□ 0.55
CALM3P0DP25 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.49■□□□□ 0.55
CALM3P0DP25 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.49■□□□□ 0.55
CALM3P0DP25 AL607033.1-201ENST00000623900 1599 ntBASIC18.49■□□□□ 0.55
CALM3P0DP25 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.49■□□□□ 0.55
CALM3P0DP25 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.49■□□□□ 0.55
CALM3P0DP25 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALM3P0DP25 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CALM3P0DP25 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.48■□□□□ 0.55
CALM3P0DP25 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.48■□□□□ 0.55
CALM3P0DP25 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
CALM3P0DP25 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CALM3P0DP25 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.48■□□□□ 0.55
CALM3P0DP25 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.48■□□□□ 0.55
CALM3P0DP25 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.48■□□□□ 0.55
CALM3P0DP25 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.48■□□□□ 0.55
CALM3P0DP25 AC044860.1-202ENST00000559481 777 ntBASIC18.48■□□□□ 0.55
CALM3P0DP25 AC009407.1-201ENST00000568958 598 ntBASIC18.48■□□□□ 0.55
CALM3P0DP25 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
CALM3P0DP25 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.48■□□□□ 0.55
CALM3P0DP25 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALM3P0DP25 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms