Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 CHCHD2P3-201ENST00000603038 451 ntBASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 MTHFR-217ENST00000641820 1569 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 PCDHB19P-201ENST00000570871 2371 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 TARDBPP1-201ENST00000442013 1203 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AC093004.1-201ENST00000508850 424 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AC005225.4-201ENST00000557330 545 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 TP53TG3HP-202ENST00000569755 579 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AL450472.2-201ENST00000603663 1156 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 AC018695.7-201ENST00000624587 2492 ntBASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRGAP2CP0DJJ0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 AP003680.1-201ENST00000598970 3660 ntBASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 AC005034.1-201ENST00000426657 489 ntBASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 AC012645.4-201ENST00000610691 1061 ntBASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRGAP2CP0DJJ0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms