Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC20.56■□□□□ 0.88
COL5A2P05997 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
COL5A2P05997 AL645939.5-201ENST00000606834 243 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL5A2P05997 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.56■□□□□ 0.88
COL5A2P05997 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.56■□□□□ 0.88
COL5A2P05997 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL5A2P05997 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL5A2P05997 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL5A2P05997 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.56■□□□□ 0.88
COL5A2P05997 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.56■□□□□ 0.88
COL5A2P05997 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 MIR648-201ENST00000385046 94 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 MIR769-201ENST00000390225 118 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC20.56■□□□□ 0.88
COL5A2P05997 COX5BP1-201ENST00000507622 393 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.56■□□□□ 0.88
COL5A2P05997 MIR5572-201ENST00000583188 137 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.56■□□□□ 0.88
COL5A2P05997 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.56■□□□□ 0.88
COL5A2P05997 CU633904.3-201ENST00000624042 1029 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.56■□□□□ 0.88
COL5A2P05997 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL5A2P05997 AC092171.3-201ENST00000610122 2651 ntBASIC20.56■□□□□ 0.88
COL5A2P05997 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
COL5A2P05997 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COL5A2P05997 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.55■□□□□ 0.88
COL5A2P05997 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
COL5A2P05997 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.55■□□□□ 0.88
COL5A2P05997 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 AL354877.1-201ENST00000424412 413 ntBASIC20.55■□□□□ 0.88
COL5A2P05997 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COL5A2P05997 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.55■□□□□ 0.88
COL5A2P05997 EIF3FP3-201ENST00000434851 1086 ntBASIC20.55■□□□□ 0.88
COL5A2P05997 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.55■□□□□ 0.88
COL5A2P05997 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.55■□□□□ 0.88
COL5A2P05997 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.55■□□□□ 0.88
COL5A2P05997 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC20.55■□□□□ 0.88
COL5A2P05997 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.55■□□□□ 0.88
COL5A2P05997 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.55■□□□□ 0.88
COL5A2P05997 AC025181.2-201ENST00000606994 802 ntBASIC20.55■□□□□ 0.88
COL5A2P05997 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL5A2P05997 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.55■□□□□ 0.88
COL5A2P05997 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 AC022188.1-201ENST00000620960 1664 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 KRT8P14-201ENST00000414254 1442 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.54■□□□□ 0.88
COL5A2P05997 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 AL139094.1-201ENST00000405549 1188 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL5A2P05997 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.54■□□□□ 0.88
COL5A2P05997 POM121L8P-201ENST00000417732 1281 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 FAM8A4P-201ENST00000435433 1213 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC20.54■□□□□ 0.88
COL5A2P05997 POM121L9P-203ENST00000441984 1285 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 RN7SL11P-201ENST00000471305 293 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.54■□□□□ 0.88
COL5A2P05997 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC20.54■□□□□ 0.88
COL5A2P05997 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.54■□□□□ 0.88
COL5A2P05997 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL5A2P05997 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL5A2P05997 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC20.54■□□□□ 0.88
COL5A2P05997 AC092978.1-202ENST00000637590 1327 ntBASIC20.54■□□□□ 0.88
COL5A2P05997 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL5A2P05997 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.54■□□□□ 0.88
COL5A2P05997 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms