Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQB1P01920 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQB1P01920 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQB1P01920 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AC117489.1-201ENST00000625169 3217 ntBASIC13.82□□□□□ -0.2
HLA-DQB1P01920 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AC004706.3-202ENST00000621574 984 ntBASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AL139288.1-201ENST00000623748 933 ntBASIC13.82□□□□□ -0.2
HLA-DQB1P01920 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 AC023024.2-201ENST00000623561 1993 ntBASIC13.82□□□□□ -0.2
HLA-DQB1P01920 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQB1P01920 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 AC079781.5-202ENST00000641784 3743 ntBASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 RBM17P3-201ENST00000417687 1192 ntBASIC13.81□□□□□ -0.2
HLA-DQB1P01920 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms