Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
RTN3O95197 EEF1DP4-201ENST00000446006 880 ntBASIC16.85■□□□□ 0.29
RTN3O95197 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.85■□□□□ 0.29
RTN3O95197 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.85■□□□□ 0.29
RTN3O95197 AC135586.1-201ENST00000539323 574 ntBASIC16.85■□□□□ 0.29
RTN3O95197 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RTN3O95197 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 KRT8P37-201ENST00000451609 1420 ntBASIC16.85■□□□□ 0.29
RTN3O95197 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.85■□□□□ 0.29
RTN3O95197 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN3O95197 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.85■□□□□ 0.29
RTN3O95197 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RTN3O95197 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
RTN3O95197 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.84■□□□□ 0.29
RTN3O95197 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.84■□□□□ 0.29
RTN3O95197 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RTN3O95197 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RTN3O95197 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 MIR648-201ENST00000385046 94 ntBASIC16.84■□□□□ 0.29
RTN3O95197 AL035633.1-201ENST00000406139 838 ntBASIC16.84■□□□□ 0.29
RTN3O95197 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.84■□□□□ 0.29
RTN3O95197 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.84■□□□□ 0.29
RTN3O95197 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.84■□□□□ 0.29
RTN3O95197 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 AC044860.1-202ENST00000559481 777 ntBASIC16.84■□□□□ 0.29
RTN3O95197 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.84■□□□□ 0.29
RTN3O95197 AC004233.3-201ENST00000607794 1269 ntBASIC16.84■□□□□ 0.29
RTN3O95197 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.84■□□□□ 0.29
RTN3O95197 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 AC004840.1-201ENST00000636359 365 ntBASIC16.84■□□□□ 0.29
RTN3O95197 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RTN3O95197 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.84■□□□□ 0.29
RTN3O95197 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RTN3O95197 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.84■□□□□ 0.29
RTN3O95197 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN3O95197 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.83■□□□□ 0.29
RTN3O95197 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN3O95197 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RTN3O95197 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN3O95197 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN3O95197 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN3O95197 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN3O95197 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN3O95197 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN3O95197 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
RTN3O95197 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RTN3O95197 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RTN3O95197 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.83■□□□□ 0.28
RTN3O95197 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.83■□□□□ 0.28
RTN3O95197 HIST3H2BA-201ENST00000436555 524 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms