Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF4O60810 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF4O60810 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF4O60810 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.33■□□□□ 0.05
PRAMEF4O60810 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF4O60810 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.33■□□□□ 0.05
PRAMEF4O60810 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PRAMEF4O60810 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.33■□□□□ 0.04
PRAMEF4O60810 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF4O60810 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF4O60810 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 AL607033.1-201ENST00000623900 1599 ntBASIC15.32■□□□□ 0.04
PRAMEF4O60810 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 AC136604.1-201ENST00000418535 575 ntBASIC15.32■□□□□ 0.04
PRAMEF4O60810 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 TSEN15P1-201ENST00000423257 515 ntBASIC15.32■□□□□ 0.04
PRAMEF4O60810 MTND6P24-201ENST00000440466 518 ntBASIC15.32■□□□□ 0.04
PRAMEF4O60810 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 AP001160.2-201ENST00000596071 487 ntBASIC15.32■□□□□ 0.04
PRAMEF4O60810 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 KRT8P12-202ENST00000472924 1397 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms