Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMARCA5O60264 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMARCA5O60264 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCA5O60264 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SMARCA5O60264 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCA5O60264 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCA5O60264 SPDYE17-201ENST00000412399 783 ntBASIC19.68■□□□□ 0.74
SMARCA5O60264 AL080243.2-201ENST00000418783 582 ntBASIC19.68■□□□□ 0.74
SMARCA5O60264 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCA5O60264 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCA5O60264 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCA5O60264 DUX4L27-201ENST00000554796 1261 ntBASIC19.68■□□□□ 0.74
SMARCA5O60264 HNRNPUP1-201ENST00000554987 333 ntBASIC19.68■□□□□ 0.74
SMARCA5O60264 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCA5O60264 AC051619.7-201ENST00000568314 623 ntBASIC19.68■□□□□ 0.74
SMARCA5O60264 AL450472.2-201ENST00000603663 1156 ntBASIC19.68■□□□□ 0.74
SMARCA5O60264 AC097359.3-201ENST00000603982 1210 ntBASIC19.68■□□□□ 0.74
SMARCA5O60264 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCA5O60264 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCA5O60264 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCA5O60264 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCA5O60264 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCA5O60264 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SMARCA5O60264 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCA5O60264 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCA5O60264 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 AC144831.1-201ENST00000573312 2656 ntBASIC19.67■□□□□ 0.74
SMARCA5O60264 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCA5O60264 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.67■□□□□ 0.74
SMARCA5O60264 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCA5O60264 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 AC125807.1-201ENST00000483097 614 ntBASIC19.67■□□□□ 0.74
SMARCA5O60264 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 AC025678.2-201ENST00000562061 970 ntBASIC19.67■□□□□ 0.74
SMARCA5O60264 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.67■□□□□ 0.74
SMARCA5O60264 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.67■□□□□ 0.74
SMARCA5O60264 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.67■□□□□ 0.74
SMARCA5O60264 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 AL138828.2-201ENST00000615812 383 ntBASIC19.67■□□□□ 0.74
SMARCA5O60264 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SMARCA5O60264 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCA5O60264 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SMARCA5O60264 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 AL035456.1-201ENST00000456064 1369 ntBASIC19.67■□□□□ 0.74
SMARCA5O60264 KRT8P12-202ENST00000472924 1397 ntBASIC19.67■□□□□ 0.74
SMARCA5O60264 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCA5O60264 AL596257.1-201ENST00000641463 2694 ntBASIC19.67■□□□□ 0.74
SMARCA5O60264 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SMARCA5O60264 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCA5O60264 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCA5O60264 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCA5O60264 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.66■□□□□ 0.74
SMARCA5O60264 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCA5O60264 AC092183.1-201ENST00000469884 875 ntBASIC19.66■□□□□ 0.74
SMARCA5O60264 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCA5O60264 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.66■□□□□ 0.74
SMARCA5O60264 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.66■□□□□ 0.74
SMARCA5O60264 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SMARCA5O60264 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCA5O60264 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
SMARCA5O60264 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCA5O60264 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCA5O60264 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms