Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.57■□□□□ 0.24
MSI1O43347 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.57■□□□□ 0.24
MSI1O43347 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.57■□□□□ 0.24
MSI1O43347 AC004461.2-201ENST00000629517 803 ntBASIC16.57■□□□□ 0.24
MSI1O43347 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
MSI1O43347 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 AL513523.2-202ENST00000427283 2040 ntBASIC16.57■□□□□ 0.24
MSI1O43347 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 AC112504.1-201ENST00000623415 1841 ntBASIC16.56■□□□□ 0.24
MSI1O43347 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 AC008741.2-201ENST00000612792 3115 ntBASIC16.56■□□□□ 0.24
MSI1O43347 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.56■□□□□ 0.24
MSI1O43347 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 FAM207CP-201ENST00000443486 507 ntBASIC16.56■□□□□ 0.24
MSI1O43347 GNAQP1-201ENST00000444815 1067 ntBASIC16.56■□□□□ 0.24
MSI1O43347 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.56■□□□□ 0.24
MSI1O43347 AL589987.1-201ENST00000453380 819 ntBASIC16.56■□□□□ 0.24
MSI1O43347 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.56■□□□□ 0.24
MSI1O43347 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 SDHAP3-202ENST00000515467 728 ntBASIC16.56■□□□□ 0.24
MSI1O43347 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.56■□□□□ 0.24
MSI1O43347 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.56■□□□□ 0.24
MSI1O43347 AC138761.1-201ENST00000584393 385 ntBASIC16.56■□□□□ 0.24
MSI1O43347 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.56■□□□□ 0.24
MSI1O43347 AL450472.2-201ENST00000603663 1156 ntBASIC16.56■□□□□ 0.24
MSI1O43347 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MSI1O43347 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.56■□□□□ 0.24
MSI1O43347 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 AC011477.6-201ENST00000604980 1927 ntBASIC16.55■□□□□ 0.24
MSI1O43347 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MSI1O43347 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.55■□□□□ 0.24
MSI1O43347 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.55■□□□□ 0.24
MSI1O43347 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 AC114501.2-201ENST00000439631 535 ntBASIC16.55■□□□□ 0.24
MSI1O43347 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.55■□□□□ 0.24
MSI1O43347 PHKG1P2-201ENST00000457537 863 ntBASIC16.55■□□□□ 0.24
MSI1O43347 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MSI1O43347 TERF1P3-201ENST00000505638 1227 ntBASIC16.55■□□□□ 0.24
MSI1O43347 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.55■□□□□ 0.24
MSI1O43347 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.55■□□□□ 0.24
MSI1O43347 HNRNPUP1-201ENST00000554987 333 ntBASIC16.55■□□□□ 0.24
MSI1O43347 LINC01115-203ENST00000606068 577 ntBASIC16.55■□□□□ 0.24
MSI1O43347 AC009118.2-201ENST00000613275 655 ntBASIC16.55■□□□□ 0.24
MSI1O43347 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MSI1O43347 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.55■□□□□ 0.24
MSI1O43347 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms