Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 LETM1P2-201ENST00000597330 2178 ntBASIC16.8■□□□□ 0.28
TNRC18O15417 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.8■□□□□ 0.28
TNRC18O15417 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TNRC18O15417 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TNRC18O15417 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.8■□□□□ 0.28
TNRC18O15417 RBPMSLP-201ENST00000433427 502 ntBASIC16.8■□□□□ 0.28
TNRC18O15417 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.8■□□□□ 0.28
TNRC18O15417 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
TNRC18O15417 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 MIR4313-201ENST00000580760 101 ntBASIC16.8■□□□□ 0.28
TNRC18O15417 AC009955.4-201ENST00000597192 544 ntBASIC16.8■□□□□ 0.28
TNRC18O15417 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.79■□□□□ 0.28
TNRC18O15417 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.79■□□□□ 0.28
TNRC18O15417 AL672207.1-201ENST00000328462 1570 ntBASIC16.79■□□□□ 0.28
TNRC18O15417 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 TUBB8P12-201ENST00000308911 1335 ntBASIC16.79■□□□□ 0.28
TNRC18O15417 TUBB7P-202ENST00000428444 1305 ntBASIC16.79■□□□□ 0.28
TNRC18O15417 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TNRC18O15417 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TNRC18O15417 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.79■□□□□ 0.28
TNRC18O15417 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.79■□□□□ 0.28
TNRC18O15417 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.79■□□□□ 0.28
TNRC18O15417 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNRC18O15417 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TNRC18O15417 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.78■□□□□ 0.28
TNRC18O15417 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC16.78■□□□□ 0.28
TNRC18O15417 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC16.78■□□□□ 0.28
TNRC18O15417 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.78■□□□□ 0.28
TNRC18O15417 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.78■□□□□ 0.28
TNRC18O15417 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.78■□□□□ 0.28
TNRC18O15417 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.78■□□□□ 0.28
TNRC18O15417 AC110057.1-201ENST00000636031 898 ntBASIC16.78■□□□□ 0.28
TNRC18O15417 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TNRC18O15417 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.78■□□□□ 0.28
TNRC18O15417 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.78■□□□□ 0.28
TNRC18O15417 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TNRC18O15417 AC106827.1-201ENST00000366454 431 ntBASIC16.78■□□□□ 0.28
TNRC18O15417 Z69890.1-201ENST00000382990 339 ntBASIC16.78■□□□□ 0.28
TNRC18O15417 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.78■□□□□ 0.28
TNRC18O15417 PGAM1P12-201ENST00000505622 748 ntBASIC16.78■□□□□ 0.28
TNRC18O15417 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TNRC18O15417 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC16.78■□□□□ 0.28
TNRC18O15417 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 WASH7P-201ENST00000488147 1351 ntBASIC16.78■□□□□ 0.28
TNRC18O15417 AC104581.1-202ENST00000635932 2618 ntBASIC16.78■□□□□ 0.28
TNRC18O15417 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNRC18O15417 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNRC18O15417 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TNRC18O15417 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNRC18O15417 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.77■□□□□ 0.28
TNRC18O15417 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.77■□□□□ 0.28
TNRC18O15417 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.77■□□□□ 0.28
TNRC18O15417 AL109837.1-201ENST00000603272 613 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNRC18O15417 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNRC18O15417 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNRC18O15417 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.77■□□□□ 0.28
TNRC18O15417 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms