Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
RDH13Q8NBN7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RDH13Q8NBN7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RDH13Q8NBN7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.68■■□□□ 1.7
RDH13Q8NBN7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.68■■□□□ 1.7
RDH13Q8NBN7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.68■■□□□ 1.7
RDH13Q8NBN7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
RDH13Q8NBN7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RDH13Q8NBN7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RDH13Q8NBN7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RDH13Q8NBN7 AC074183.2-201ENST00000623112 922 ntBASIC25.67■■□□□ 1.7
RDH13Q8NBN7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.67■■□□□ 1.7
RDH13Q8NBN7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.66■■□□□ 1.7
RDH13Q8NBN7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RDH13Q8NBN7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RDH13Q8NBN7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
RDH13Q8NBN7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 AL592295.1-201ENST00000400984 884 ntBASIC25.63■■□□□ 1.69
RDH13Q8NBN7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 AC019171.1-201ENST00000601251 1056 ntBASIC25.63■■□□□ 1.69
RDH13Q8NBN7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RDH13Q8NBN7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RDH13Q8NBN7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.62■■□□□ 1.69
RDH13Q8NBN7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.62■■□□□ 1.69
RDH13Q8NBN7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RDH13Q8NBN7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RDH13Q8NBN7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RDH13Q8NBN7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RDH13Q8NBN7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.61■■□□□ 1.69
RDH13Q8NBN7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.61■■□□□ 1.69
RDH13Q8NBN7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RDH13Q8NBN7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RDH13Q8NBN7 KRT8P33-201ENST00000508125 1423 ntBASIC25.61■■□□□ 1.69
RDH13Q8NBN7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RDH13Q8NBN7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RDH13Q8NBN7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
RDH13Q8NBN7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RDH13Q8NBN7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
RDH13Q8NBN7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.6■■□□□ 1.69
RDH13Q8NBN7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.6■■□□□ 1.69
RDH13Q8NBN7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
RDH13Q8NBN7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 AC135731.1-201ENST00000569415 2548 ntBASIC25.59■■□□□ 1.69
RDH13Q8NBN7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RDH13Q8NBN7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
RDH13Q8NBN7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RDH13Q8NBN7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.58■■□□□ 1.69
RDH13Q8NBN7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.58■■□□□ 1.69
RDH13Q8NBN7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RDH13Q8NBN7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RDH13Q8NBN7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.57■■□□□ 1.68
RDH13Q8NBN7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.57■■□□□ 1.68
RDH13Q8NBN7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RDH13Q8NBN7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.57■■□□□ 1.68
RDH13Q8NBN7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.57■■□□□ 1.68
RDH13Q8NBN7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RDH13Q8NBN7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RDH13Q8NBN7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.56■■□□□ 1.68
RDH13Q8NBN7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
RDH13Q8NBN7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.56■■□□□ 1.68
RDH13Q8NBN7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RDH13Q8NBN7 AC103834.1-201ENST00000520383 144 ntBASIC25.55■■□□□ 1.68
RDH13Q8NBN7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
RDH13Q8NBN7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms