Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
CroccQ8CJ40 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CroccQ8CJ40 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.34■□□□□ 0.85
CroccQ8CJ40 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CroccQ8CJ40 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CroccQ8CJ40 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CroccQ8CJ40 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.33■□□□□ 0.85
CroccQ8CJ40 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
CroccQ8CJ40 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CroccQ8CJ40 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CroccQ8CJ40 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CroccQ8CJ40 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CroccQ8CJ40 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.32■□□□□ 0.84
CroccQ8CJ40 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CroccQ8CJ40 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CroccQ8CJ40 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CroccQ8CJ40 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
CroccQ8CJ40 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CroccQ8CJ40 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CroccQ8CJ40 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CroccQ8CJ40 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.3■□□□□ 0.84
CroccQ8CJ40 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.3■□□□□ 0.84
CroccQ8CJ40 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CroccQ8CJ40 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CroccQ8CJ40 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CroccQ8CJ40 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CroccQ8CJ40 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.29■□□□□ 0.84
CroccQ8CJ40 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.29■□□□□ 0.84
CroccQ8CJ40 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CroccQ8CJ40 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CroccQ8CJ40 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CroccQ8CJ40 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CroccQ8CJ40 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CroccQ8CJ40 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CroccQ8CJ40 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CroccQ8CJ40 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CroccQ8CJ40 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CroccQ8CJ40 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CroccQ8CJ40 Gm13238-201ENSMUST00000117655 780 ntBASIC20.27■□□□□ 0.84
CroccQ8CJ40 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.27■□□□□ 0.84
CroccQ8CJ40 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.27■□□□□ 0.84
CroccQ8CJ40 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CroccQ8CJ40 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CroccQ8CJ40 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CroccQ8CJ40 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CroccQ8CJ40 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.26■□□□□ 0.83
CroccQ8CJ40 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CroccQ8CJ40 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CroccQ8CJ40 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CroccQ8CJ40 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CroccQ8CJ40 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CroccQ8CJ40 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CroccQ8CJ40 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CroccQ8CJ40 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CroccQ8CJ40 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CroccQ8CJ40 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CroccQ8CJ40 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms