Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2BCQ6DN03 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.52■□□□□ 0.88
HIST2H2BCQ6DN03 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
HIST2H2BCQ6DN03 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HIST2H2BCQ6DN03 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST2H2BCQ6DN03 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.52■□□□□ 0.88
HIST2H2BCQ6DN03 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HIST2H2BCQ6DN03 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HIST2H2BCQ6DN03 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.51■□□□□ 0.87
HIST2H2BCQ6DN03 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.51■□□□□ 0.87
HIST2H2BCQ6DN03 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2BCQ6DN03 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2BCQ6DN03 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.51■□□□□ 0.87
HIST2H2BCQ6DN03 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2BCQ6DN03 AL139393.2-201ENST00000608721 2025 ntBASIC20.5■□□□□ 0.87
HIST2H2BCQ6DN03 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2BCQ6DN03 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HIST2H2BCQ6DN03 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST2H2BCQ6DN03 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.49■□□□□ 0.87
HIST2H2BCQ6DN03 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.49■□□□□ 0.87
HIST2H2BCQ6DN03 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.49■□□□□ 0.87
HIST2H2BCQ6DN03 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.49■□□□□ 0.87
HIST2H2BCQ6DN03 SNX5-217ENST00000606557 1087 ntBASIC20.49■□□□□ 0.87
HIST2H2BCQ6DN03 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 SYT6-210ENST00000641643 1587 ntBASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 AC099791.1-201ENST00000416440 715 ntBASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.48■□□□□ 0.87
HIST2H2BCQ6DN03 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 AC027682.1-201ENST00000562846 899 ntBASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2BCQ6DN03 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HIST2H2BCQ6DN03 ABHD17AP1-201ENST00000358206 933 ntBASIC20.46■□□□□ 0.87
HIST2H2BCQ6DN03 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.46■□□□□ 0.87
HIST2H2BCQ6DN03 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
HIST2H2BCQ6DN03 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.46■□□□□ 0.87
HIST2H2BCQ6DN03 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.46■□□□□ 0.87
HIST2H2BCQ6DN03 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.46■□□□□ 0.87
HIST2H2BCQ6DN03 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
HIST2H2BCQ6DN03 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2BCQ6DN03 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2BCQ6DN03 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HIST2H2BCQ6DN03 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2BCQ6DN03 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 SERBP1P1-201ENST00000396021 1160 ntBASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L19-201ENST00000557448 1267 ntBASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 MIR6722-201ENST00000617286 78 ntBASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2BCQ6DN03 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2BCQ6DN03 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HIST2H2BCQ6DN03 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2BCQ6DN03 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L2-201ENST00000561772 1275 ntBASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L6-201ENST00000626483 1275 ntBASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L1-201ENST00000627662 1275 ntBASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L8-201ENST00000629013 1275 ntBASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L3-201ENST00000630187 1275 ntBASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L7-201ENST00000630678 1275 ntBASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 DUX4L5-201ENST00000630834 1275 ntBASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2BCQ6DN03 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.41■□□□□ 0.86
HIST2H2BCQ6DN03 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST2H2BCQ6DN03 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST2H2BCQ6DN03 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST2H2BCQ6DN03 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms