Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM258P61165 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM258P61165 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM258P61165 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TMEM258P61165 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM258P61165 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM258P61165 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM258P61165 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM258P61165 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM258P61165 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM258P61165 PROC-203ENST00000409048 1586 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM258P61165 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM258P61165 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM258P61165 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM258P61165 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TMEM258P61165 AC097639.1-201ENST00000565519 1891 ntBASIC14.26□□□□□ -0.13
TMEM258P61165 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM258P61165 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM258P61165 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 ME2-208ENST00000638937 2471 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM258P61165 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM258P61165 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM258P61165 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM258P61165 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 AL135925.1-201ENST00000605920 1701 ntBASIC14.25□□□□□ -0.13
TMEM258P61165 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TMEM258P61165 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM258P61165 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM258P61165 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM258P61165 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM258P61165 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM258P61165 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TMEM258P61165 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM258P61165 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM258P61165 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM258P61165 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TMEM258P61165 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM258P61165 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TMEM258P61165 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM258P61165 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM258P61165 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM258P61165 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM258P61165 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM258P61165 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM258P61165 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM258P61165 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM258P61165 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM258P61165 AC007375.3-201ENST00000600936 2314 ntBASIC14.23□□□□□ -0.13
TMEM258P61165 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM258P61165 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM258P61165 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM258P61165 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM258P61165 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TMEM258P61165 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 DUSP8P3-201ENST00000399571 1760 ntBASIC14.22□□□□□ -0.13
TMEM258P61165 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM258P61165 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TMEM258P61165 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TMEM258P61165 EP400NL-214ENST00000641289 2402 ntBASIC14.22□□□□□ -0.13
TMEM258P61165 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM258P61165 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMEM258P61165 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM258P61165 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM258P61165 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM258P61165 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM258P61165 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM258P61165 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM258P61165 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM258P61165 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM258P61165 AC073130.3-201ENST00000624389 2278 ntBASIC14.19□□□□□ -0.14
TMEM258P61165 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TMEM258P61165 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM258P61165 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TMEM258P61165 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM258P61165 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms