Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRRX1P54821 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRRX1P54821 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRRX1P54821 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRRX1P54821 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.23■□□□□ 0.67
PRRX1P54821 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRRX1P54821 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.23■□□□□ 0.67
PRRX1P54821 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PRRX1P54821 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRRX1P54821 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRRX1P54821 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.22■□□□□ 0.67
PRRX1P54821 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRRX1P54821 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRRX1P54821 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PRRX1P54821 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRRX1P54821 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.22■□□□□ 0.67
PRRX1P54821 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRRX1P54821 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRRX1P54821 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRRX1P54821 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRRX1P54821 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRRX1P54821 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRRX1P54821 AC022616.5-201ENST00000518796 181 ntBASIC19.21■□□□□ 0.67
PRRX1P54821 AC022211.4-201ENST00000625094 2161 ntBASIC19.21■□□□□ 0.67
PRRX1P54821 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRRX1P54821 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRRX1P54821 AC142381.3-201ENST00000568208 1670 ntBASIC19.2■□□□□ 0.66
PRRX1P54821 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.2■□□□□ 0.66
PRRX1P54821 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PRRX1P54821 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.2■□□□□ 0.66
PRRX1P54821 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.2■□□□□ 0.66
PRRX1P54821 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
PRRX1P54821 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRRX1P54821 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.19■□□□□ 0.66
PRRX1P54821 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRRX1P54821 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRRX1P54821 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.18■□□□□ 0.66
PRRX1P54821 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRRX1P54821 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.18■□□□□ 0.66
PRRX1P54821 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRRX1P54821 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.18■□□□□ 0.66
PRRX1P54821 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRRX1P54821 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRRX1P54821 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRRX1P54821 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PRRX1P54821 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRRX1P54821 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRRX1P54821 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.17■□□□□ 0.66
PRRX1P54821 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.17■□□□□ 0.66
PRRX1P54821 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.17■□□□□ 0.66
PRRX1P54821 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRRX1P54821 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PRRX1P54821 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRRX1P54821 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRRX1P54821 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRRX1P54821 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.16■□□□□ 0.66
PRRX1P54821 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRRX1P54821 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.16■□□□□ 0.66
PRRX1P54821 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.16■□□□□ 0.66
PRRX1P54821 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.16■□□□□ 0.66
PRRX1P54821 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRRX1P54821 AC010980.1-201ENST00000587192 1142 ntBASIC19.16■□□□□ 0.66
PRRX1P54821 AP003733.4-201ENST00000623785 1697 ntBASIC19.16■□□□□ 0.66
PRRX1P54821 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRRX1P54821 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRRX1P54821 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRRX1P54821 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRRX1P54821 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRRX1P54821 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.15■□□□□ 0.66
PRRX1P54821 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.15■□□□□ 0.66
PRRX1P54821 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.15■□□□□ 0.66
PRRX1P54821 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.15■□□□□ 0.66
PRRX1P54821 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRRX1P54821 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRRX1P54821 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRRX1P54821 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms