Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf115Q9D0C1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.82■■□□□ 1.4
Rnf115Q9D0C1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf115Q9D0C1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.78■■□□□ 1.4
Rnf115Q9D0C1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.78■■□□□ 1.4
Rnf115Q9D0C1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf115Q9D0C1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf115Q9D0C1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.74■■□□□ 1.39
Rnf115Q9D0C1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Rnf115Q9D0C1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.67■■□□□ 1.38
Rnf115Q9D0C1 Gm27322-201ENSMUST00000184007 104 ntBASIC23.66■■□□□ 1.38
Rnf115Q9D0C1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Rnf115Q9D0C1 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.65■■□□□ 1.38
Rnf115Q9D0C1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf115Q9D0C1 Gm24804-201ENSMUST00000174982 85 ntBASIC23.64■■□□□ 1.37
Rnf115Q9D0C1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf115Q9D0C1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rnf115Q9D0C1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf115Q9D0C1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.53■■□□□ 1.36
Rnf115Q9D0C1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf115Q9D0C1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf115Q9D0C1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf115Q9D0C1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rnf115Q9D0C1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.45■■□□□ 1.34
Rnf115Q9D0C1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf115Q9D0C1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.4■■□□□ 1.34
Rnf115Q9D0C1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf115Q9D0C1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf115Q9D0C1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf115Q9D0C1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf115Q9D0C1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf115Q9D0C1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf115Q9D0C1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf115Q9D0C1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.26■■□□□ 1.31
Rnf115Q9D0C1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.22■■□□□ 1.31
Rnf115Q9D0C1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.22■■□□□ 1.31
Rnf115Q9D0C1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf115Q9D0C1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf115Q9D0C1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf115Q9D0C1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf115Q9D0C1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf115Q9D0C1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf115Q9D0C1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf115Q9D0C1 Zfp131-205ENSMUST00000223812 663 ntBASIC23.15■■□□□ 1.3
Rnf115Q9D0C1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Rnf115Q9D0C1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rnf115Q9D0C1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf115Q9D0C1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf115Q9D0C1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf115Q9D0C1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rnf115Q9D0C1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf115Q9D0C1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf115Q9D0C1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf115Q9D0C1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf115Q9D0C1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf115Q9D0C1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf115Q9D0C1 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.04■■□□□ 1.28
Rnf115Q9D0C1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.03■■□□□ 1.28
Rnf115Q9D0C1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf115Q9D0C1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf115Q9D0C1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rnf115Q9D0C1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf115Q9D0C1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf115Q9D0C1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf115Q9D0C1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf115Q9D0C1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf115Q9D0C1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Rnf115Q9D0C1 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.91■■□□□ 1.26
Rnf115Q9D0C1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf115Q9D0C1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.87■■□□□ 1.25
Rnf115Q9D0C1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf115Q9D0C1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf115Q9D0C1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf115Q9D0C1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf115Q9D0C1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.82■■□□□ 1.24
Rnf115Q9D0C1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rnf115Q9D0C1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.76■■□□□ 1.23
Rnf115Q9D0C1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf115Q9D0C1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf115Q9D0C1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Rnf115Q9D0C1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf115Q9D0C1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf115Q9D0C1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf115Q9D0C1 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.71■■□□□ 1.23
Rnf115Q9D0C1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf115Q9D0C1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf115Q9D0C1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf115Q9D0C1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Rnf115Q9D0C1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf115Q9D0C1 Gm16148-201ENSMUST00000119653 893 ntBASIC22.67■■□□□ 1.22
Rnf115Q9D0C1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf115Q9D0C1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf115Q9D0C1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf115Q9D0C1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Rnf115Q9D0C1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf115Q9D0C1 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.59■■□□□ 1.21
Rnf115Q9D0C1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf115Q9D0C1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.54■■□□□ 1.2
Rnf115Q9D0C1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf115Q9D0C1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms