Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sec61bQ9CQS8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sec61bQ9CQS8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sec61bQ9CQS8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sec61bQ9CQS8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61bQ9CQS8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC14.89□□□□□ -0.03
Sec61bQ9CQS8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61bQ9CQS8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61bQ9CQS8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61bQ9CQS8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61bQ9CQS8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61bQ9CQS8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC14.82□□□□□ -0.04
Sec61bQ9CQS8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61bQ9CQS8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sec61bQ9CQS8 Gm42596-201ENSMUST00000196305 1958 ntBASIC14.78□□□□□ -0.04
Sec61bQ9CQS8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61bQ9CQS8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61bQ9CQS8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC14.74□□□□□ -0.05
Sec61bQ9CQS8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC14.74□□□□□ -0.05
Sec61bQ9CQS8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61bQ9CQS8 Gm24804-201ENSMUST00000174982 85 ntBASIC14.71□□□□□ -0.05
Sec61bQ9CQS8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61bQ9CQS8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61bQ9CQS8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sec61bQ9CQS8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.65□□□□□ -0.06
Sec61bQ9CQS8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sec61bQ9CQS8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sec61bQ9CQS8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sec61bQ9CQS8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sec61bQ9CQS8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sec61bQ9CQS8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sec61bQ9CQS8 AC166822.3-201ENSMUST00000227394 661 ntBASIC14.57□□□□□ -0.08
Sec61bQ9CQS8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC14.56□□□□□ -0.08
Sec61bQ9CQS8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61bQ9CQS8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61bQ9CQS8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61bQ9CQS8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61bQ9CQS8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61bQ9CQS8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61bQ9CQS8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61bQ9CQS8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61bQ9CQS8 AL845457.1-201ENSMUST00000197244 68 ntBASIC14.5□□□□□ -0.09
Sec61bQ9CQS8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61bQ9CQS8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC14.49□□□□□ -0.09
Sec61bQ9CQS8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61bQ9CQS8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61bQ9CQS8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sec61bQ9CQS8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sec61bQ9CQS8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61bQ9CQS8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61bQ9CQS8 Zfp131-205ENSMUST00000223812 663 ntBASIC14.41□□□□□ -0.1
Sec61bQ9CQS8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61bQ9CQS8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61bQ9CQS8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sec61bQ9CQS8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sec61bQ9CQS8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61bQ9CQS8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.37□□□□□ -0.11
Sec61bQ9CQS8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61bQ9CQS8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sec61bQ9CQS8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61bQ9CQS8 Gm16148-201ENSMUST00000119653 893 ntBASIC14.33□□□□□ -0.12
Sec61bQ9CQS8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sec61bQ9CQS8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61bQ9CQS8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61bQ9CQS8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61bQ9CQS8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61bQ9CQS8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.28□□□□□ -0.12
Sec61bQ9CQS8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.27□□□□□ -0.13
Sec61bQ9CQS8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61bQ9CQS8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61bQ9CQS8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sec61bQ9CQS8 Zfp131-207ENSMUST00000224946 1783 ntBASIC14.26□□□□□ -0.13
Sec61bQ9CQS8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61bQ9CQS8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sec61bQ9CQS8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61bQ9CQS8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61bQ9CQS8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61bQ9CQS8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Sec61bQ9CQS8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61bQ9CQS8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sec61bQ9CQS8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61bQ9CQS8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61bQ9CQS8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61bQ9CQS8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61bQ9CQS8 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.19□□□□□ -0.14
Sec61bQ9CQS8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61bQ9CQS8 Peli2-204ENSMUST00000226513 1320 ntBASIC14.16□□□□□ -0.14
Sec61bQ9CQS8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61bQ9CQS8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61bQ9CQS8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sec61bQ9CQS8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61bQ9CQS8 Mipep-204ENSMUST00000225043 1548 ntBASIC14.13□□□□□ -0.15
Sec61bQ9CQS8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61bQ9CQS8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61bQ9CQS8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61bQ9CQS8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61bQ9CQS8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61bQ9CQS8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC14.11□□□□□ -0.15
Sec61bQ9CQS8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Sec61bQ9CQS8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms