Protein–RNA interactions for Protein: Q91VF6

Col26a1, Collagen alpha-1(XXVI) chain, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col26a1Q91VF6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,72
Col26a1Q91VF6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Col26a1Q91VF6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31,98■■■□□ 2,71
Col26a1Q91VF6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,97■■■□□ 2,71
Col26a1Q91VF6 Tdp2-203ENSMUST00000223804 1136 ntBASIC31,97■■■□□ 2,71
Col26a1Q91VF6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31,94■■■□□ 2,7
Col26a1Q91VF6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31,93■■■□□ 2,7
Col26a1Q91VF6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31,84■■■□□ 2,69
Col26a1Q91VF6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31,82■■■□□ 2,68
Col26a1Q91VF6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31,76■■■□□ 2,67
Col26a1Q91VF6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31,73■■■□□ 2,67
Col26a1Q91VF6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31,69■■■□□ 2,66
Col26a1Q91VF6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31,64■■■□□ 2,66
Col26a1Q91VF6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,62■■■□□ 2,65
Col26a1Q91VF6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31,59■■■□□ 2,65
Col26a1Q91VF6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31,58■■■□□ 2,65
Col26a1Q91VF6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31,56■■■□□ 2,64
Col26a1Q91VF6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31,55■■■□□ 2,64
Col26a1Q91VF6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Col26a1Q91VF6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31,53■■■□□ 2,64
Col26a1Q91VF6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,52■■■□□ 2,64
Col26a1Q91VF6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31,52■■■□□ 2,64
Col26a1Q91VF6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31,48■■■□□ 2,63
Col26a1Q91VF6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31,47■■■□□ 2,63
Col26a1Q91VF6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,47■■■□□ 2,63
Col26a1Q91VF6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31,44■■■□□ 2,62
Col26a1Q91VF6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31,44■■■□□ 2,62
Col26a1Q91VF6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31,43■■■□□ 2,62
Col26a1Q91VF6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31,4■■■□□ 2,62
Col26a1Q91VF6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31,4■■■□□ 2,62
Col26a1Q91VF6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31,39■■■□□ 2,62
Col26a1Q91VF6 Gm15039-201ENSMUST00000118914 875 ntBASIC31,37■■■□□ 2,61
Col26a1Q91VF6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,36■■■□□ 2,61
Col26a1Q91VF6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31,35■■■□□ 2,61
Col26a1Q91VF6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Col26a1Q91VF6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31,33■■■□□ 2,61
Col26a1Q91VF6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31,33■■■□□ 2,61
Col26a1Q91VF6 Gm45855-201ENSMUST00000212546 880 ntBASIC31,32■■■□□ 2,6
Col26a1Q91VF6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Col26a1Q91VF6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Col26a1Q91VF6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31,29■■■□□ 2,6
Col26a1Q91VF6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31,28■■■□□ 2,6
Col26a1Q91VF6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31,27■■■□□ 2,6
Col26a1Q91VF6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31,26■■■□□ 2,6
Col26a1Q91VF6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31,26■■■□□ 2,59
Col26a1Q91VF6 Gm16148-201ENSMUST00000119653 893 ntBASIC31,24■■■□□ 2,59
Col26a1Q91VF6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31,2■■■□□ 2,59
Col26a1Q91VF6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31,2■■■□□ 2,59
Col26a1Q91VF6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31,2■■■□□ 2,59
Col26a1Q91VF6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31,17■■■□□ 2,58
Col26a1Q91VF6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31,15■■■□□ 2,58
Col26a1Q91VF6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31,14■■■□□ 2,58
Col26a1Q91VF6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31,14■■■□□ 2,58
Col26a1Q91VF6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31,1■■■□□ 2,57
Col26a1Q91VF6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31,08■■■□□ 2,57
Col26a1Q91VF6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31,07■■■□□ 2,56
Col26a1Q91VF6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31,05■■■□□ 2,56
Col26a1Q91VF6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31,04■■■□□ 2,56
Col26a1Q91VF6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31,03■■■□□ 2,56
Col26a1Q91VF6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Col26a1Q91VF6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2,55
Col26a1Q91VF6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30,93■■■□□ 2,54
Col26a1Q91VF6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30,93■■■□□ 2,54
Col26a1Q91VF6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30,9■■■□□ 2,54
Col26a1Q91VF6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Col26a1Q91VF6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30,87■■■□□ 2,53
Col26a1Q91VF6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30,86■■■□□ 2,53
Col26a1Q91VF6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Col26a1Q91VF6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Col26a1Q91VF6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Col26a1Q91VF6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30,79■■■□□ 2,52
Col26a1Q91VF6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Col26a1Q91VF6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Col26a1Q91VF6 AC166822.3-201ENSMUST00000227394 661 ntBASIC30,78■■■□□ 2,52
Col26a1Q91VF6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30,78■■■□□ 2,52
Col26a1Q91VF6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30,77■■■□□ 2,52
Col26a1Q91VF6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30,75■■■□□ 2,51
Col26a1Q91VF6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Col26a1Q91VF6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Col26a1Q91VF6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30,73■■■□□ 2,51
Col26a1Q91VF6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30,7■■■□□ 2,51
Col26a1Q91VF6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,5
Col26a1Q91VF6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Col26a1Q91VF6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30,62■■■□□ 2,49
Col26a1Q91VF6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30,61■■■□□ 2,49
Col26a1Q91VF6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30,61■■■□□ 2,49
Col26a1Q91VF6 Gm8503-201ENSMUST00000118131 455 ntBASIC30,6■■■□□ 2,49
Col26a1Q91VF6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Col26a1Q91VF6 Gm9397-201ENSMUST00000200125 605 ntBASIC30,55■■■□□ 2,48
Col26a1Q91VF6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Col26a1Q91VF6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30,52■■■□□ 2,48
Col26a1Q91VF6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Col26a1Q91VF6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Col26a1Q91VF6 Gm9939-201ENSMUST00000067161 1154 ntBASIC30,45■■■□□ 2,47
Col26a1Q91VF6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30,43■■■□□ 2,46
Col26a1Q91VF6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30,41■■■□□ 2,46
Col26a1Q91VF6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30,38■■■□□ 2,45
Col26a1Q91VF6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30,35■■■□□ 2,45
Col26a1Q91VF6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30,35■■■□□ 2,45
Col26a1Q91VF6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30,3■■■□□ 2,44
Retrieved 100 of 76,532 protein–RNA pairs in 10,9 ms