Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.83■■□□□ 1.56
Cuedc1Q8R3V6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
Cuedc1Q8R3V6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Cuedc1Q8R3V6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Cuedc1Q8R3V6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cuedc1Q8R3V6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Cuedc1Q8R3V6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.74■■□□□ 1.55
Cuedc1Q8R3V6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.72■■□□□ 1.55
Cuedc1Q8R3V6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cuedc1Q8R3V6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.65■■□□□ 1.54
Cuedc1Q8R3V6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Cuedc1Q8R3V6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cuedc1Q8R3V6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cuedc1Q8R3V6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.57■■□□□ 1.52
Cuedc1Q8R3V6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cuedc1Q8R3V6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cuedc1Q8R3V6 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.56■■□□□ 1.52
Cuedc1Q8R3V6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cuedc1Q8R3V6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cuedc1Q8R3V6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cuedc1Q8R3V6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cuedc1Q8R3V6 Zfp131-205ENSMUST00000223812 663 ntBASIC24.52■■□□□ 1.52
Cuedc1Q8R3V6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cuedc1Q8R3V6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cuedc1Q8R3V6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cuedc1Q8R3V6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cuedc1Q8R3V6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cuedc1Q8R3V6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cuedc1Q8R3V6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cuedc1Q8R3V6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cuedc1Q8R3V6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cuedc1Q8R3V6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.37■■□□□ 1.49
Cuedc1Q8R3V6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cuedc1Q8R3V6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cuedc1Q8R3V6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cuedc1Q8R3V6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cuedc1Q8R3V6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cuedc1Q8R3V6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cuedc1Q8R3V6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.26■■□□□ 1.47
Cuedc1Q8R3V6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Cuedc1Q8R3V6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.24■■□□□ 1.47
Cuedc1Q8R3V6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cuedc1Q8R3V6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.2■■□□□ 1.46
Cuedc1Q8R3V6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cuedc1Q8R3V6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cuedc1Q8R3V6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cuedc1Q8R3V6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cuedc1Q8R3V6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cuedc1Q8R3V6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cuedc1Q8R3V6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.13■■□□□ 1.45
Cuedc1Q8R3V6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cuedc1Q8R3V6 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.12■■□□□ 1.45
Cuedc1Q8R3V6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cuedc1Q8R3V6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cuedc1Q8R3V6 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.11■■□□□ 1.45
Cuedc1Q8R3V6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.1■■□□□ 1.45
Cuedc1Q8R3V6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Cuedc1Q8R3V6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.07■■□□□ 1.44
Cuedc1Q8R3V6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cuedc1Q8R3V6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cuedc1Q8R3V6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cuedc1Q8R3V6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cuedc1Q8R3V6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Cuedc1Q8R3V6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cuedc1Q8R3V6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cuedc1Q8R3V6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cuedc1Q8R3V6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.87■■□□□ 1.41
Cuedc1Q8R3V6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cuedc1Q8R3V6 Gm16148-201ENSMUST00000119653 893 ntBASIC23.86■■□□□ 1.41
Cuedc1Q8R3V6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Cuedc1Q8R3V6 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.84■■□□□ 1.41
Cuedc1Q8R3V6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cuedc1Q8R3V6 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.83■■□□□ 1.41
Cuedc1Q8R3V6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cuedc1Q8R3V6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cuedc1Q8R3V6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cuedc1Q8R3V6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Cuedc1Q8R3V6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.74■■□□□ 1.39
Cuedc1Q8R3V6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cuedc1Q8R3V6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cuedc1Q8R3V6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cuedc1Q8R3V6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cuedc1Q8R3V6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Cuedc1Q8R3V6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cuedc1Q8R3V6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cuedc1Q8R3V6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cuedc1Q8R3V6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cuedc1Q8R3V6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.67■■□□□ 1.38
Cuedc1Q8R3V6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cuedc1Q8R3V6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cuedc1Q8R3V6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Cuedc1Q8R3V6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Cuedc1Q8R3V6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cuedc1Q8R3V6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.61■■□□□ 1.37
Cuedc1Q8R3V6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cuedc1Q8R3V6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cuedc1Q8R3V6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Cuedc1Q8R3V6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.57■■□□□ 1.36
Cuedc1Q8R3V6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cuedc1Q8R3V6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms