Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC40,54■■■■■ 4,08
Abca8aQ8K442 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC40,46■■■■■ 4,07
Abca8aQ8K442 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC40,44■■■■■ 4,07
Abca8aQ8K442 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC40,43■■■■■ 4,06
Abca8aQ8K442 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC40,42■■■■■ 4,06
Abca8aQ8K442 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC40,41■■■■■ 4,06
Abca8aQ8K442 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC40,41■■■■■ 4,06
Abca8aQ8K442 CT025624.2-201ENSMUST00000223609 1909 ntBASIC40,31■■■■■ 4,04
Abca8aQ8K442 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC40,23■■■■■ 4,03
Abca8aQ8K442 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC40,22■■■■■ 4,03
Abca8aQ8K442 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC40,2■■■■■ 4,03
Abca8aQ8K442 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC40,18■■■■■ 4,02
Abca8aQ8K442 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC40,14■■■■■ 4,02
Abca8aQ8K442 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC40,12■■■■■ 4,01
Abca8aQ8K442 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC40,03■■■■■ 4
Abca8aQ8K442 Gm27322-201ENSMUST00000184007 104 ntBASIC39,98■■■■□ 3,99
Abca8aQ8K442 Gm24804-201ENSMUST00000174982 85 ntBASIC39,98■■■■□ 3,99
Abca8aQ8K442 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC39,97■■■■□ 3,99
Abca8aQ8K442 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC39,94■■■■□ 3,98
Abca8aQ8K442 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC39,94■■■■□ 3,98
Abca8aQ8K442 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC39,92■■■■□ 3,98
Abca8aQ8K442 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC39,9■■■■□ 3,98
Abca8aQ8K442 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC39,86■■■■□ 3,97
Abca8aQ8K442 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC39,83■■■■□ 3,97
Abca8aQ8K442 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC39,83■■■■□ 3,97
Abca8aQ8K442 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC39,71■■■■□ 3,95
Abca8aQ8K442 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC39,62■■■■□ 3,93
Abca8aQ8K442 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC39,62■■■■□ 3,93
Abca8aQ8K442 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC39,58■■■■□ 3,93
Abca8aQ8K442 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC39,54■■■■□ 3,92
Abca8aQ8K442 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC39,43■■■■□ 3,9
Abca8aQ8K442 AC166822.3-201ENSMUST00000227394 661 ntBASIC39,43■■■■□ 3,9
Abca8aQ8K442 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC39,43■■■■□ 3,9
Abca8aQ8K442 AL845457.1-201ENSMUST00000197244 68 ntBASIC39,42■■■■□ 3,9
Abca8aQ8K442 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC39,38■■■■□ 3,89
Abca8aQ8K442 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC39,37■■■■□ 3,89
Abca8aQ8K442 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC39,36■■■■□ 3,89
Abca8aQ8K442 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC39,35■■■■□ 3,89
Abca8aQ8K442 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC39,34■■■■□ 3,89
Abca8aQ8K442 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC39,34■■■■□ 3,89
Abca8aQ8K442 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC39,33■■■■□ 3,89
Abca8aQ8K442 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC39,33■■■■□ 3,89
Abca8aQ8K442 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC39,32■■■■□ 3,89
Abca8aQ8K442 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC39,32■■■■□ 3,89
Abca8aQ8K442 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC39,3■■■■□ 3,88
Abca8aQ8K442 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC39,24■■■■□ 3,87
Abca8aQ8K442 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC39,2■■■■□ 3,87
Abca8aQ8K442 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC39,2■■■■□ 3,87
Abca8aQ8K442 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC39,18■■■■□ 3,86
Abca8aQ8K442 Zfp131-205ENSMUST00000223812 663 ntBASIC39,15■■■■□ 3,86
Abca8aQ8K442 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC39,1■■■■□ 3,85
Abca8aQ8K442 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC39,08■■■■□ 3,85
Abca8aQ8K442 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC39,05■■■■□ 3,84
Abca8aQ8K442 Zfp131-207ENSMUST00000224946 1783 ntBASIC39,05■■■■□ 3,84
Abca8aQ8K442 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC39,04■■■■□ 3,84
Abca8aQ8K442 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC39,02■■■■□ 3,84
Abca8aQ8K442 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC39,01■■■■□ 3,84
Abca8aQ8K442 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC38,96■■■■□ 3,83
Abca8aQ8K442 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC38,95■■■■□ 3,83
Abca8aQ8K442 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC38,95■■■■□ 3,83
Abca8aQ8K442 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC38,91■■■■□ 3,82
Abca8aQ8K442 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC38,89■■■■□ 3,82
Abca8aQ8K442 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC38,88■■■■□ 3,81
Abca8aQ8K442 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC38,87■■■■□ 3,81
Abca8aQ8K442 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC38,86■■■■□ 3,81
Abca8aQ8K442 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC38,85■■■■□ 3,81
Abca8aQ8K442 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC38,81■■■■□ 3,8
Abca8aQ8K442 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC38,77■■■■□ 3,8
Abca8aQ8K442 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC38,76■■■■□ 3,8
Abca8aQ8K442 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC38,71■■■■□ 3,79
Abca8aQ8K442 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC38,7■■■■□ 3,79
Abca8aQ8K442 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC38,65■■■■□ 3,78
Abca8aQ8K442 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC38,61■■■■□ 3,77
Abca8aQ8K442 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC38,58■■■■□ 3,77
Abca8aQ8K442 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC38,57■■■■□ 3,76
Abca8aQ8K442 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC38,53■■■■□ 3,76
Abca8aQ8K442 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC38,52■■■■□ 3,76
Abca8aQ8K442 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC38,47■■■■□ 3,75
Abca8aQ8K442 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC38,45■■■■□ 3,75
Abca8aQ8K442 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC38,45■■■■□ 3,75
Abca8aQ8K442 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38,44■■■■□ 3,74
Abca8aQ8K442 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC38,44■■■■□ 3,74
Abca8aQ8K442 Peli2-204ENSMUST00000226513 1320 ntBASIC38,42■■■■□ 3,74
Abca8aQ8K442 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC38,41■■■■□ 3,74
Abca8aQ8K442 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC38,38■■■■□ 3,74
Abca8aQ8K442 Gm16148-201ENSMUST00000119653 893 ntBASIC38,38■■■■□ 3,73
Abca8aQ8K442 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC38,36■■■■□ 3,73
Abca8aQ8K442 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC38,36■■■■□ 3,73
Abca8aQ8K442 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC38,34■■■■□ 3,73
Abca8aQ8K442 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC38,31■■■■□ 3,72
Abca8aQ8K442 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC38,31■■■■□ 3,72
Abca8aQ8K442 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC38,3■■■■□ 3,72
Abca8aQ8K442 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC38,29■■■■□ 3,72
Abca8aQ8K442 Mipep-204ENSMUST00000225043 1548 ntBASIC38,28■■■■□ 3,72
Abca8aQ8K442 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC38,28■■■■□ 3,72
Abca8aQ8K442 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC38,26■■■■□ 3,71
Abca8aQ8K442 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC38,26■■■■□ 3,71
Abca8aQ8K442 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC38,23■■■■□ 3,71
Abca8aQ8K442 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC38,23■■■■□ 3,71
Abca8aQ8K442 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC38,23■■■■□ 3,71
Retrieved 100 of 76,532 protein–RNA pairs in 52,4 ms