Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhlrc1Q8BR37 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.45■■□□□ 1.02
Nhlrc1Q8BR37 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nhlrc1Q8BR37 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.42■■□□□ 1.02
Nhlrc1Q8BR37 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhlrc1Q8BR37 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhlrc1Q8BR37 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Nhlrc1Q8BR37 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.36■■□□□ 1.01
Nhlrc1Q8BR37 Gm27322-201ENSMUST00000184007 104 ntBASIC21.32■■□□□ 1
Nhlrc1Q8BR37 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nhlrc1Q8BR37 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nhlrc1Q8BR37 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Nhlrc1Q8BR37 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nhlrc1Q8BR37 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nhlrc1Q8BR37 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nhlrc1Q8BR37 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.23■□□□□ 0.99
Nhlrc1Q8BR37 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nhlrc1Q8BR37 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nhlrc1Q8BR37 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nhlrc1Q8BR37 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nhlrc1Q8BR37 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nhlrc1Q8BR37 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nhlrc1Q8BR37 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.08■□□□□ 0.97
Nhlrc1Q8BR37 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.07■□□□□ 0.96
Nhlrc1Q8BR37 Gm24804-201ENSMUST00000174982 85 ntBASIC21.05■□□□□ 0.96
Nhlrc1Q8BR37 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nhlrc1Q8BR37 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nhlrc1Q8BR37 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nhlrc1Q8BR37 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nhlrc1Q8BR37 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.97■□□□□ 0.95
Nhlrc1Q8BR37 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.96■□□□□ 0.95
Nhlrc1Q8BR37 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhlrc1Q8BR37 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nhlrc1Q8BR37 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Nhlrc1Q8BR37 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhlrc1Q8BR37 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Nhlrc1Q8BR37 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.85■□□□□ 0.93
Nhlrc1Q8BR37 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhlrc1Q8BR37 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhlrc1Q8BR37 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.8■□□□□ 0.92
Nhlrc1Q8BR37 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nhlrc1Q8BR37 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nhlrc1Q8BR37 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.79■□□□□ 0.92
Nhlrc1Q8BR37 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nhlrc1Q8BR37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nhlrc1Q8BR37 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhlrc1Q8BR37 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nhlrc1Q8BR37 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nhlrc1Q8BR37 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nhlrc1Q8BR37 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nhlrc1Q8BR37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nhlrc1Q8BR37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nhlrc1Q8BR37 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nhlrc1Q8BR37 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Nhlrc1Q8BR37 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nhlrc1Q8BR37 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nhlrc1Q8BR37 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nhlrc1Q8BR37 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nhlrc1Q8BR37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.57■□□□□ 0.88
Nhlrc1Q8BR37 Zfp131-205ENSMUST00000223812 663 ntBASIC20.57■□□□□ 0.88
Nhlrc1Q8BR37 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.57■□□□□ 0.88
Nhlrc1Q8BR37 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlrc1Q8BR37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlrc1Q8BR37 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlrc1Q8BR37 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nhlrc1Q8BR37 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nhlrc1Q8BR37 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nhlrc1Q8BR37 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nhlrc1Q8BR37 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nhlrc1Q8BR37 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nhlrc1Q8BR37 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nhlrc1Q8BR37 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nhlrc1Q8BR37 Gm16148-201ENSMUST00000119653 893 ntBASIC20.43■□□□□ 0.86
Nhlrc1Q8BR37 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nhlrc1Q8BR37 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhlrc1Q8BR37 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhlrc1Q8BR37 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nhlrc1Q8BR37 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nhlrc1Q8BR37 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nhlrc1Q8BR37 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.38■□□□□ 0.85
Nhlrc1Q8BR37 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nhlrc1Q8BR37 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhlrc1Q8BR37 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.36■□□□□ 0.85
Nhlrc1Q8BR37 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nhlrc1Q8BR37 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nhlrc1Q8BR37 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.34■□□□□ 0.85
Nhlrc1Q8BR37 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nhlrc1Q8BR37 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nhlrc1Q8BR37 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nhlrc1Q8BR37 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.33■□□□□ 0.85
Nhlrc1Q8BR37 Peli2-204ENSMUST00000226513 1320 ntBASIC20.32■□□□□ 0.84
Nhlrc1Q8BR37 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nhlrc1Q8BR37 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nhlrc1Q8BR37 Mipep-204ENSMUST00000225043 1548 ntBASIC20.29■□□□□ 0.84
Nhlrc1Q8BR37 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nhlrc1Q8BR37 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms