Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Scn3bQ8BHK2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,37■■□□□ 1,65
Scn3bQ8BHK2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25,31■■□□□ 1,64
Scn3bQ8BHK2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,29■■□□□ 1,64
Scn3bQ8BHK2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Scn3bQ8BHK2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25,25■■□□□ 1,63
Scn3bQ8BHK2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,24■■□□□ 1,63
Scn3bQ8BHK2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25,2■■□□□ 1,63
Scn3bQ8BHK2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Scn3bQ8BHK2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25,12■■□□□ 1,61
Scn3bQ8BHK2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,11■■□□□ 1,61
Scn3bQ8BHK2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Scn3bQ8BHK2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25,08■■□□□ 1,61
Scn3bQ8BHK2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25,07■■□□□ 1,6
Scn3bQ8BHK2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,06■■□□□ 1,6
Scn3bQ8BHK2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,04■■□□□ 1,6
Scn3bQ8BHK2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25,03■■□□□ 1,6
Scn3bQ8BHK2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Scn3bQ8BHK2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Scn3bQ8BHK2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
Scn3bQ8BHK2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Scn3bQ8BHK2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Scn3bQ8BHK2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24,95■■□□□ 1,58
Scn3bQ8BHK2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24,91■■□□□ 1,58
Scn3bQ8BHK2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Scn3bQ8BHK2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24,86■■□□□ 1,57
Scn3bQ8BHK2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,85■■□□□ 1,57
Scn3bQ8BHK2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24,82■■□□□ 1,56
Scn3bQ8BHK2 Gm2415-204ENSMUST00000190235 2004 ntBASIC24,8■■□□□ 1,56
Scn3bQ8BHK2 Gm27325-201ENSMUST00000175467 74 ntBASIC24,74■■□□□ 1,55
Scn3bQ8BHK2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
Scn3bQ8BHK2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Scn3bQ8BHK2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24,65■■□□□ 1,54
Scn3bQ8BHK2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24,63■■□□□ 1,53
Scn3bQ8BHK2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24,62■■□□□ 1,53
Scn3bQ8BHK2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24,62■■□□□ 1,53
Scn3bQ8BHK2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Scn3bQ8BHK2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24,61■■□□□ 1,53
Scn3bQ8BHK2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24,6■■□□□ 1,53
Scn3bQ8BHK2 Gm6658-202ENSMUST00000209493 1885 ntBASIC24,59■■□□□ 1,53
Scn3bQ8BHK2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Scn3bQ8BHK2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Scn3bQ8BHK2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,52
Scn3bQ8BHK2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24,56■■□□□ 1,52
Scn3bQ8BHK2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24,55■■□□□ 1,52
Scn3bQ8BHK2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Scn3bQ8BHK2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Scn3bQ8BHK2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
Scn3bQ8BHK2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Scn3bQ8BHK2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24,49■■□□□ 1,51
Scn3bQ8BHK2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24,49■■□□□ 1,51
Scn3bQ8BHK2 Zfp131-207ENSMUST00000224946 1783 ntBASIC24,47■■□□□ 1,51
Scn3bQ8BHK2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24,46■■□□□ 1,51
Scn3bQ8BHK2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24,46■■□□□ 1,51
Scn3bQ8BHK2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24,45■■□□□ 1,5
Scn3bQ8BHK2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24,44■■□□□ 1,5
Scn3bQ8BHK2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Scn3bQ8BHK2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24,42■■□□□ 1,5
Scn3bQ8BHK2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,5
Scn3bQ8BHK2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,5
Scn3bQ8BHK2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Scn3bQ8BHK2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
Scn3bQ8BHK2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24,36■■□□□ 1,49
Scn3bQ8BHK2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24,36■■□□□ 1,49
Scn3bQ8BHK2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24,35■■□□□ 1,49
Scn3bQ8BHK2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24,32■■□□□ 1,48
Scn3bQ8BHK2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Scn3bQ8BHK2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24,3■■□□□ 1,48
Scn3bQ8BHK2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Scn3bQ8BHK2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24,26■■□□□ 1,47
Scn3bQ8BHK2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Scn3bQ8BHK2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24,22■■□□□ 1,47
Scn3bQ8BHK2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24,22■■□□□ 1,47
Scn3bQ8BHK2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Scn3bQ8BHK2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24,2■■□□□ 1,47
Scn3bQ8BHK2 Gm9905-201ENSMUST00000065740 1845 ntBASIC24,2■■□□□ 1,46
Scn3bQ8BHK2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24,2■■□□□ 1,46
Scn3bQ8BHK2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24,19■■□□□ 1,46
Scn3bQ8BHK2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Scn3bQ8BHK2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Scn3bQ8BHK2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24,19■■□□□ 1,46
Scn3bQ8BHK2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Scn3bQ8BHK2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24,18■■□□□ 1,46
Scn3bQ8BHK2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24,18■■□□□ 1,46
Scn3bQ8BHK2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Scn3bQ8BHK2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,17■■□□□ 1,46
Scn3bQ8BHK2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24,16■■□□□ 1,46
Scn3bQ8BHK2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Scn3bQ8BHK2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24,15■■□□□ 1,46
Scn3bQ8BHK2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24,13■■□□□ 1,45
Scn3bQ8BHK2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24,11■■□□□ 1,45
Scn3bQ8BHK2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,11■■□□□ 1,45
Scn3bQ8BHK2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24,1■■□□□ 1,45
Scn3bQ8BHK2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24,09■■□□□ 1,45
Scn3bQ8BHK2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24,07■■□□□ 1,44
Scn3bQ8BHK2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24,06■■□□□ 1,44
Scn3bQ8BHK2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24,06■■□□□ 1,44
Scn3bQ8BHK2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Scn3bQ8BHK2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Scn3bQ8BHK2 Gm6206-201ENSMUST00000133472 2199 ntBASIC24,05■■□□□ 1,44
Retrieved 100 of 76,532 protein–RNA pairs in 12,2 ms