Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.59■■□□□ 1.69
Ubr5Q80TP3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
Ubr5Q80TP3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr5Q80TP3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr5Q80TP3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr5Q80TP3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr5Q80TP3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.47■■□□□ 1.67
Ubr5Q80TP3 Psd-208ENSMUST00000224556 2034 ntBASIC25.47■■□□□ 1.67
Ubr5Q80TP3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr5Q80TP3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr5Q80TP3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Ubr5Q80TP3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr5Q80TP3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr5Q80TP3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr5Q80TP3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ubr5Q80TP3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ubr5Q80TP3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ubr5Q80TP3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Ubr5Q80TP3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.17■■□□□ 1.62
Ubr5Q80TP3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.16■■□□□ 1.62
Ubr5Q80TP3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.15■■□□□ 1.62
Ubr5Q80TP3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ubr5Q80TP3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ubr5Q80TP3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr5Q80TP3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr5Q80TP3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr5Q80TP3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ubr5Q80TP3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr5Q80TP3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr5Q80TP3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr5Q80TP3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.02■■□□□ 1.6
Ubr5Q80TP3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ubr5Q80TP3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Ubr5Q80TP3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.98■■□□□ 1.59
Ubr5Q80TP3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Ubr5Q80TP3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Ubr5Q80TP3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ubr5Q80TP3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ubr5Q80TP3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Ubr5Q80TP3 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.87■■□□□ 1.57
Ubr5Q80TP3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ubr5Q80TP3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.82■■□□□ 1.56
Ubr5Q80TP3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ubr5Q80TP3 Gm16148-201ENSMUST00000119653 893 ntBASIC24.82■■□□□ 1.56
Ubr5Q80TP3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ubr5Q80TP3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ubr5Q80TP3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ubr5Q80TP3 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.71■■□□□ 1.55
Ubr5Q80TP3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr5Q80TP3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ubr5Q80TP3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.68■■□□□ 1.54
Ubr5Q80TP3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr5Q80TP3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr5Q80TP3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Ubr5Q80TP3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ubr5Q80TP3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ubr5Q80TP3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ubr5Q80TP3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ubr5Q80TP3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Ubr5Q80TP3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ubr5Q80TP3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr5Q80TP3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Ubr5Q80TP3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ubr5Q80TP3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.58■■□□□ 1.53
Ubr5Q80TP3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.57■■□□□ 1.52
Ubr5Q80TP3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Ubr5Q80TP3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ubr5Q80TP3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ubr5Q80TP3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.55■■□□□ 1.52
Ubr5Q80TP3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ubr5Q80TP3 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.53■■□□□ 1.52
Ubr5Q80TP3 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.53■■□□□ 1.52
Ubr5Q80TP3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr5Q80TP3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
Ubr5Q80TP3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.5■■□□□ 1.51
Ubr5Q80TP3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr5Q80TP3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr5Q80TP3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.47■■□□□ 1.51
Ubr5Q80TP3 Gm45855-201ENSMUST00000212546 880 ntBASIC24.46■■□□□ 1.51
Ubr5Q80TP3 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.46■■□□□ 1.51
Ubr5Q80TP3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr5Q80TP3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr5Q80TP3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr5Q80TP3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr5Q80TP3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr5Q80TP3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ubr5Q80TP3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.34■■□□□ 1.49
Ubr5Q80TP3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Ubr5Q80TP3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ubr5Q80TP3 Peli2-204ENSMUST00000226513 1320 ntBASIC24.3■■□□□ 1.48
Ubr5Q80TP3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ubr5Q80TP3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.29■■□□□ 1.48
Ubr5Q80TP3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.29■■□□□ 1.48
Ubr5Q80TP3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.28■■□□□ 1.48
Ubr5Q80TP3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ubr5Q80TP3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms