Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.59■■□□□ 1.69
Ubr5Q80TP3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
Ubr5Q80TP3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubr5Q80TP3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr5Q80TP3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr5Q80TP3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr5Q80TP3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.47■■□□□ 1.67
Ubr5Q80TP3 Psd-208ENSMUST00000224556 2034 ntBASIC25.47■■□□□ 1.67
Ubr5Q80TP3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr5Q80TP3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr5Q80TP3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Ubr5Q80TP3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr5Q80TP3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr5Q80TP3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr5Q80TP3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ubr5Q80TP3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ubr5Q80TP3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ubr5Q80TP3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Ubr5Q80TP3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.17■■□□□ 1.62
Ubr5Q80TP3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.16■■□□□ 1.62
Ubr5Q80TP3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.15■■□□□ 1.62
Ubr5Q80TP3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ubr5Q80TP3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ubr5Q80TP3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr5Q80TP3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr5Q80TP3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr5Q80TP3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ubr5Q80TP3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr5Q80TP3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr5Q80TP3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr5Q80TP3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.02■■□□□ 1.6
Ubr5Q80TP3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ubr5Q80TP3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Ubr5Q80TP3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.98■■□□□ 1.59
Ubr5Q80TP3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Ubr5Q80TP3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Ubr5Q80TP3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ubr5Q80TP3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ubr5Q80TP3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Ubr5Q80TP3 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.87■■□□□ 1.57
Ubr5Q80TP3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ubr5Q80TP3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.82■■□□□ 1.56
Ubr5Q80TP3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ubr5Q80TP3 Gm16148-201ENSMUST00000119653 893 ntBASIC24.82■■□□□ 1.56
Ubr5Q80TP3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ubr5Q80TP3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ubr5Q80TP3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ubr5Q80TP3 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.71■■□□□ 1.55
Ubr5Q80TP3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ubr5Q80TP3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ubr5Q80TP3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.68■■□□□ 1.54
Ubr5Q80TP3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ubr5Q80TP3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ubr5Q80TP3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Ubr5Q80TP3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ubr5Q80TP3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ubr5Q80TP3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ubr5Q80TP3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ubr5Q80TP3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Ubr5Q80TP3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ubr5Q80TP3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr5Q80TP3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Ubr5Q80TP3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ubr5Q80TP3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.58■■□□□ 1.53
Ubr5Q80TP3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.57■■□□□ 1.52
Ubr5Q80TP3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Ubr5Q80TP3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ubr5Q80TP3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ubr5Q80TP3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.55■■□□□ 1.52
Ubr5Q80TP3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ubr5Q80TP3 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.53■■□□□ 1.52
Ubr5Q80TP3 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.53■■□□□ 1.52
Ubr5Q80TP3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr5Q80TP3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
Ubr5Q80TP3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.5■■□□□ 1.51
Ubr5Q80TP3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr5Q80TP3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr5Q80TP3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.47■■□□□ 1.51
Ubr5Q80TP3 Gm45855-201ENSMUST00000212546 880 ntBASIC24.46■■□□□ 1.51
Ubr5Q80TP3 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.46■■□□□ 1.51
Ubr5Q80TP3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr5Q80TP3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr5Q80TP3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr5Q80TP3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr5Q80TP3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr5Q80TP3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr5Q80TP3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ubr5Q80TP3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.34■■□□□ 1.49
Ubr5Q80TP3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Ubr5Q80TP3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ubr5Q80TP3 Peli2-204ENSMUST00000226513 1320 ntBASIC24.3■■□□□ 1.48
Ubr5Q80TP3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ubr5Q80TP3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.29■■□□□ 1.48
Ubr5Q80TP3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.29■■□□□ 1.48
Ubr5Q80TP3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.28■■□□□ 1.48
Ubr5Q80TP3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ubr5Q80TP3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms