Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.96■□□□□ 0.79
Csmd3Q80T79 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Csmd3Q80T79 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Csmd3Q80T79 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.89■□□□□ 0.78
Csmd3Q80T79 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Csmd3Q80T79 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Csmd3Q80T79 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Csmd3Q80T79 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Csmd3Q80T79 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Csmd3Q80T79 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.79■□□□□ 0.76
Csmd3Q80T79 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Csmd3Q80T79 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csmd3Q80T79 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Csmd3Q80T79 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Csmd3Q80T79 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Csmd3Q80T79 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Csmd3Q80T79 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Csmd3Q80T79 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Csmd3Q80T79 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Csmd3Q80T79 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Csmd3Q80T79 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Csmd3Q80T79 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Csmd3Q80T79 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Csmd3Q80T79 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Csmd3Q80T79 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Csmd3Q80T79 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Csmd3Q80T79 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Csmd3Q80T79 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Csmd3Q80T79 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.57■□□□□ 0.72
Csmd3Q80T79 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Csmd3Q80T79 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Csmd3Q80T79 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.53■□□□□ 0.72
Csmd3Q80T79 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.53■□□□□ 0.72
Csmd3Q80T79 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Csmd3Q80T79 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.52■□□□□ 0.71
Csmd3Q80T79 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Csmd3Q80T79 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Csmd3Q80T79 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Csmd3Q80T79 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Csmd3Q80T79 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.46■□□□□ 0.71
Csmd3Q80T79 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Csmd3Q80T79 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.44■□□□□ 0.7
Csmd3Q80T79 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Csmd3Q80T79 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Csmd3Q80T79 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Csmd3Q80T79 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Csmd3Q80T79 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Csmd3Q80T79 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Csmd3Q80T79 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.38■□□□□ 0.69
Csmd3Q80T79 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Csmd3Q80T79 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.35■□□□□ 0.69
Csmd3Q80T79 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Csmd3Q80T79 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Csmd3Q80T79 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Csmd3Q80T79 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.29■□□□□ 0.68
Csmd3Q80T79 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Csmd3Q80T79 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Csmd3Q80T79 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Csmd3Q80T79 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.25■□□□□ 0.67
Csmd3Q80T79 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Csmd3Q80T79 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Csmd3Q80T79 Gm16148-201ENSMUST00000119653 893 ntBASIC19.24■□□□□ 0.67
Csmd3Q80T79 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Csmd3Q80T79 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Csmd3Q80T79 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Csmd3Q80T79 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.18■□□□□ 0.66
Csmd3Q80T79 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Csmd3Q80T79 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csmd3Q80T79 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Csmd3Q80T79 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Csmd3Q80T79 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Csmd3Q80T79 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.15■□□□□ 0.66
Csmd3Q80T79 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Csmd3Q80T79 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Csmd3Q80T79 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.12■□□□□ 0.65
Csmd3Q80T79 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csmd3Q80T79 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Csmd3Q80T79 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Csmd3Q80T79 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Csmd3Q80T79 Gm45855-201ENSMUST00000212546 880 ntBASIC19.08■□□□□ 0.64
Csmd3Q80T79 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.08■□□□□ 0.64
Csmd3Q80T79 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.07■□□□□ 0.64
Csmd3Q80T79 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.07■□□□□ 0.64
Csmd3Q80T79 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Csmd3Q80T79 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Csmd3Q80T79 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Csmd3Q80T79 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.03■□□□□ 0.64
Csmd3Q80T79 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csmd3Q80T79 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Csmd3Q80T79 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Csmd3Q80T79 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Csmd3Q80T79 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Csmd3Q80T79 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19■□□□□ 0.63
Csmd3Q80T79 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.99■□□□□ 0.63
Csmd3Q80T79 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Csmd3Q80T79 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Csmd3Q80T79 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Csmd3Q80T79 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Csmd3Q80T79 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Csmd3Q80T79 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms