Protein–RNA interactions for Protein: Q6WKZ8

Ubr2, E3 ubiquitin-protein ligase UBR2, mousemouse

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2Q6WKZ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36,48■■■■□ 3,43
Ubr2Q6WKZ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36,48■■■■□ 3,43
Ubr2Q6WKZ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36,35■■■■□ 3,41
Ubr2Q6WKZ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC36,32■■■■□ 3,4
Ubr2Q6WKZ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC36,31■■■■□ 3,4
Ubr2Q6WKZ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC36,29■■■■□ 3,4
Ubr2Q6WKZ8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36,29■■■■□ 3,4
Ubr2Q6WKZ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC36,27■■■■□ 3,4
Ubr2Q6WKZ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC36,1■■■■□ 3,37
Ubr2Q6WKZ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC36,09■■■■□ 3,37
Ubr2Q6WKZ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC36,09■■■■□ 3,37
Ubr2Q6WKZ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC36,06■■■■□ 3,36
Ubr2Q6WKZ8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC35,98■■■■□ 3,35
Ubr2Q6WKZ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35,97■■■■□ 3,35
Ubr2Q6WKZ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35,95■■■■□ 3,35
Ubr2Q6WKZ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35,95■■■■□ 3,35
Ubr2Q6WKZ8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35,94■■■■□ 3,34
Ubr2Q6WKZ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35,85■■■■□ 3,33
Ubr2Q6WKZ8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC35,84■■■■□ 3,33
Ubr2Q6WKZ8 Gm27322-201ENSMUST00000184007 104 ntBASIC35,81■■■■□ 3,32
Ubr2Q6WKZ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC35,78■■■■□ 3,32
Ubr2Q6WKZ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC35,78■■■■□ 3,32
Ubr2Q6WKZ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC35,74■■■■□ 3,31
Ubr2Q6WKZ8 Gm24804-201ENSMUST00000174982 85 ntBASIC35,74■■■■□ 3,31
Ubr2Q6WKZ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35,72■■■■□ 3,31
Ubr2Q6WKZ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35,66■■■■□ 3,3
Ubr2Q6WKZ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC35,58■■■■□ 3,29
Ubr2Q6WKZ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35,56■■■■□ 3,28
Ubr2Q6WKZ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC35,51■■■■□ 3,28
Ubr2Q6WKZ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35,51■■■■□ 3,28
Ubr2Q6WKZ8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35,5■■■■□ 3,27
Ubr2Q6WKZ8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC35,47■■■■□ 3,27
Ubr2Q6WKZ8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC35,46■■■■□ 3,27
Ubr2Q6WKZ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC35,44■■■■□ 3,26
Ubr2Q6WKZ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC35,43■■■■□ 3,26
Ubr2Q6WKZ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC35,43■■■■□ 3,26
Ubr2Q6WKZ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC35,41■■■■□ 3,26
Ubr2Q6WKZ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC35,37■■■■□ 3,25
Ubr2Q6WKZ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC35,36■■■■□ 3,25
Ubr2Q6WKZ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC35,34■■■■□ 3,25
Ubr2Q6WKZ8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,34■■■■□ 3,25
Ubr2Q6WKZ8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,33■■■■□ 3,25
Ubr2Q6WKZ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC35,31■■■■□ 3,24
Ubr2Q6WKZ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35,31■■■■□ 3,24
Ubr2Q6WKZ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC35,29■■■■□ 3,24
Ubr2Q6WKZ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC35,28■■■■□ 3,24
Ubr2Q6WKZ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35,23■■■■□ 3,23
Ubr2Q6WKZ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35,2■■■■□ 3,23
Ubr2Q6WKZ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC35,18■■■■□ 3,22
Ubr2Q6WKZ8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35,16■■■■□ 3,22
Ubr2Q6WKZ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC35,13■■■■□ 3,21
Ubr2Q6WKZ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35,12■■■■□ 3,21
Ubr2Q6WKZ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC35,12■■■■□ 3,21
Ubr2Q6WKZ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Ubr2Q6WKZ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC35,07■■■■□ 3,2
Ubr2Q6WKZ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35,06■■■■□ 3,2
Ubr2Q6WKZ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC35,06■■■■□ 3,2
Ubr2Q6WKZ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC35,05■■■■□ 3,2
Ubr2Q6WKZ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35,03■■■■□ 3,2
Ubr2Q6WKZ8 Zfp131-205ENSMUST00000223812 663 ntBASIC35,02■■■■□ 3,2
Ubr2Q6WKZ8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35,02■■■■□ 3,2
Ubr2Q6WKZ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34,99■■■■□ 3,19
Ubr2Q6WKZ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Ubr2Q6WKZ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34,94■■■■□ 3,18
Ubr2Q6WKZ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC34,85■■■■□ 3,17
Ubr2Q6WKZ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34,85■■■■□ 3,17
Ubr2Q6WKZ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34,84■■■■□ 3,17
Ubr2Q6WKZ8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34,81■■■■□ 3,16
Ubr2Q6WKZ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34,78■■■■□ 3,16
Ubr2Q6WKZ8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC34,77■■■■□ 3,16
Ubr2Q6WKZ8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC34,72■■■■□ 3,15
Ubr2Q6WKZ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34,72■■■■□ 3,15
Ubr2Q6WKZ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC34,72■■■■□ 3,15
Ubr2Q6WKZ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34,68■■■■□ 3,14
Ubr2Q6WKZ8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34,67■■■■□ 3,14
Ubr2Q6WKZ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC34,67■■■■□ 3,14
Ubr2Q6WKZ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34,64■■■■□ 3,14
Ubr2Q6WKZ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC34,59■■■■□ 3,13
Ubr2Q6WKZ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34,57■■■■□ 3,12
Ubr2Q6WKZ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC34,52■■■■□ 3,12
Ubr2Q6WKZ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34,51■■■■□ 3,11
Ubr2Q6WKZ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34,5■■■■□ 3,11
Ubr2Q6WKZ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Ubr2Q6WKZ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC34,48■■■■□ 3,11
Ubr2Q6WKZ8 Peli2-204ENSMUST00000226513 1320 ntBASIC34,47■■■■□ 3,11
Ubr2Q6WKZ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC34,45■■■■□ 3,11
Ubr2Q6WKZ8 Mipep-204ENSMUST00000225043 1548 ntBASIC34,44■■■■□ 3,1
Ubr2Q6WKZ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34,43■■■■□ 3,1
Ubr2Q6WKZ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC34,42■■■■□ 3,1
Ubr2Q6WKZ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34,41■■■■□ 3,1
Ubr2Q6WKZ8 Gm16148-201ENSMUST00000119653 893 ntBASIC34,39■■■■□ 3,1
Ubr2Q6WKZ8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34,38■■■■□ 3,09
Ubr2Q6WKZ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34,37■■■■□ 3,09
Ubr2Q6WKZ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC34,37■■■■□ 3,09
Ubr2Q6WKZ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC34,36■■■■□ 3,09
Ubr2Q6WKZ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC34,34■■■■□ 3,09
Ubr2Q6WKZ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34,34■■■■□ 3,09
Ubr2Q6WKZ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC34,31■■■■□ 3,08
Ubr2Q6WKZ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC34,3■■■■□ 3,08
Ubr2Q6WKZ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34,29■■■■□ 3,08
Retrieved 100 of 76,532 protein–RNA pairs in 29,5 ms