Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35.93■■■■□ 3.34
Clcn1Q64347 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Clcn1Q64347 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Clcn1Q64347 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.85■■■■□ 3.33
Clcn1Q64347 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
Clcn1Q64347 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.8■■■■□ 3.32
Clcn1Q64347 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.8■■■■□ 3.32
Clcn1Q64347 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Clcn1Q64347 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.77■■■■□ 3.32
Clcn1Q64347 Gm27322-201ENSMUST00000184007 104 ntBASIC35.75■■■■□ 3.31
Clcn1Q64347 Gm24804-201ENSMUST00000174982 85 ntBASIC35.73■■■■□ 3.31
Clcn1Q64347 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.72■■■■□ 3.31
Clcn1Q64347 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Clcn1Q64347 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Clcn1Q64347 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Clcn1Q64347 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35.6■■■■□ 3.29
Clcn1Q64347 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Clcn1Q64347 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Clcn1Q64347 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC35.51■■■■□ 3.28
Clcn1Q64347 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Clcn1Q64347 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Clcn1Q64347 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.38■■■■□ 3.25
Clcn1Q64347 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Clcn1Q64347 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Clcn1Q64347 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35.18■■■■□ 3.22
Clcn1Q64347 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Clcn1Q64347 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC35.16■■■■□ 3.22
Clcn1Q64347 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35.14■■■■□ 3.22
Clcn1Q64347 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
Clcn1Q64347 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35.07■■■■□ 3.2
Clcn1Q64347 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Clcn1Q64347 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Clcn1Q64347 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC35.03■■■■□ 3.2
Clcn1Q64347 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
Clcn1Q64347 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Clcn1Q64347 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35■■■■□ 3.19
Clcn1Q64347 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Clcn1Q64347 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Clcn1Q64347 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34.98■■■■□ 3.19
Clcn1Q64347 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Clcn1Q64347 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Clcn1Q64347 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
Clcn1Q64347 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Clcn1Q64347 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Clcn1Q64347 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Clcn1Q64347 AL845457.1-201ENSMUST00000197244 68 ntBASIC34.84■■■■□ 3.17
Clcn1Q64347 Zfp131-205ENSMUST00000223812 663 ntBASIC34.84■■■■□ 3.17
Clcn1Q64347 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Clcn1Q64347 AC166822.3-201ENSMUST00000227394 661 ntBASIC34.83■■■■□ 3.17
Clcn1Q64347 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Clcn1Q64347 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
Clcn1Q64347 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Clcn1Q64347 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC34.73■■■■□ 3.15
Clcn1Q64347 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Clcn1Q64347 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Clcn1Q64347 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Clcn1Q64347 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Clcn1Q64347 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Clcn1Q64347 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Clcn1Q64347 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Clcn1Q64347 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
Clcn1Q64347 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.57■■■■□ 3.12
Clcn1Q64347 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
Clcn1Q64347 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC34.48■■■■□ 3.11
Clcn1Q64347 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Clcn1Q64347 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Clcn1Q64347 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34.41■■■■□ 3.1
Clcn1Q64347 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Clcn1Q64347 Zfp131-207ENSMUST00000224946 1783 ntBASIC34.39■■■■□ 3.1
Clcn1Q64347 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Clcn1Q64347 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC34.32■■■■□ 3.08
Clcn1Q64347 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Clcn1Q64347 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Clcn1Q64347 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Clcn1Q64347 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Clcn1Q64347 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Clcn1Q64347 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Clcn1Q64347 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34.24■■■■□ 3.07
Clcn1Q64347 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Clcn1Q64347 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC34.2■■■■□ 3.06
Clcn1Q64347 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.19■■■■□ 3.06
Clcn1Q64347 Gm16148-201ENSMUST00000119653 893 ntBASIC34.18■■■■□ 3.06
Clcn1Q64347 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34.18■■■■□ 3.06
Clcn1Q64347 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Clcn1Q64347 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Clcn1Q64347 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Clcn1Q64347 Peli2-204ENSMUST00000226513 1320 ntBASIC34.1■■■■□ 3.05
Clcn1Q64347 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Clcn1Q64347 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.05
Clcn1Q64347 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Clcn1Q64347 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Clcn1Q64347 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34.01■■■■□ 3.03
Clcn1Q64347 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Clcn1Q64347 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33.99■■■■□ 3.03
Clcn1Q64347 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC33.99■■■■□ 3.03
Clcn1Q64347 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC33.98■■■■□ 3.03
Clcn1Q64347 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.98■■■■□ 3.03
Clcn1Q64347 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
Clcn1Q64347 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33.95■■■■□ 3.03
Clcn1Q64347 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms