Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.54■■□□□ 1.2
Commd3Q63829 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Commd3Q63829 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Commd3Q63829 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Commd3Q63829 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Commd3Q63829 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Commd3Q63829 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Commd3Q63829 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Commd3Q63829 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Commd3Q63829 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Commd3Q63829 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Commd3Q63829 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Commd3Q63829 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Commd3Q63829 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Commd3Q63829 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Commd3Q63829 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Commd3Q63829 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.23■■□□□ 1.15
Commd3Q63829 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Commd3Q63829 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Commd3Q63829 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Commd3Q63829 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Commd3Q63829 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Commd3Q63829 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.18■■□□□ 1.14
Commd3Q63829 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Commd3Q63829 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.13■■□□□ 1.13
Commd3Q63829 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.13■■□□□ 1.13
Commd3Q63829 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Commd3Q63829 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Commd3Q63829 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Commd3Q63829 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Commd3Q63829 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.03■■□□□ 1.12
Commd3Q63829 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Commd3Q63829 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.99■■□□□ 1.11
Commd3Q63829 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Commd3Q63829 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Commd3Q63829 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Commd3Q63829 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Commd3Q63829 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
Commd3Q63829 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Commd3Q63829 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Commd3Q63829 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Commd3Q63829 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Commd3Q63829 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Commd3Q63829 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Commd3Q63829 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Commd3Q63829 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Commd3Q63829 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Commd3Q63829 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Commd3Q63829 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Commd3Q63829 Zxda-201ENSMUST00000117281 2621 ntBASIC21.81■■□□□ 1.08
Commd3Q63829 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Commd3Q63829 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Commd3Q63829 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Commd3Q63829 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Commd3Q63829 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Commd3Q63829 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Commd3Q63829 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.77■■□□□ 1.08
Commd3Q63829 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Commd3Q63829 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Commd3Q63829 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.76■■□□□ 1.07
Commd3Q63829 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Commd3Q63829 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Commd3Q63829 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Commd3Q63829 Gm27325-201ENSMUST00000175467 74 ntBASIC21.72■■□□□ 1.07
Commd3Q63829 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Commd3Q63829 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Commd3Q63829 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Commd3Q63829 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Commd3Q63829 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Commd3Q63829 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Commd3Q63829 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Commd3Q63829 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Commd3Q63829 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.59■■□□□ 1.05
Commd3Q63829 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Commd3Q63829 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.57■■□□□ 1.04
Commd3Q63829 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Commd3Q63829 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Commd3Q63829 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Commd3Q63829 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Commd3Q63829 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Commd3Q63829 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Commd3Q63829 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Commd3Q63829 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Commd3Q63829 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Commd3Q63829 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.48■■□□□ 1.03
Commd3Q63829 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Commd3Q63829 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Commd3Q63829 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Commd3Q63829 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.46■■□□□ 1.03
Commd3Q63829 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.45■■□□□ 1.03
Commd3Q63829 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Commd3Q63829 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Commd3Q63829 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Commd3Q63829 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Commd3Q63829 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.42■■□□□ 1.02
Commd3Q63829 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Commd3Q63829 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Commd3Q63829 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Commd3Q63829 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Commd3Q63829 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms