Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Trav2Q5R1I9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.21■■□□□ 1.15
Trav2Q5R1I9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trav2Q5R1I9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trav2Q5R1I9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav2Q5R1I9 Gm8109-201ENSMUST00000194076 746 ntBASIC22.14■■□□□ 1.13
Trav2Q5R1I9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav2Q5R1I9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trav2Q5R1I9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trav2Q5R1I9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trav2Q5R1I9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trav2Q5R1I9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trav2Q5R1I9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav2Q5R1I9 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.98■■□□□ 1.11
Trav2Q5R1I9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav2Q5R1I9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav2Q5R1I9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.96■■□□□ 1.11
Trav2Q5R1I9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
Trav2Q5R1I9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav2Q5R1I9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav2Q5R1I9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav2Q5R1I9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.91■■□□□ 1.1
Trav2Q5R1I9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav2Q5R1I9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Trav2Q5R1I9 Gm27322-201ENSMUST00000184007 104 ntBASIC21.88■■□□□ 1.09
Trav2Q5R1I9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav2Q5R1I9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trav2Q5R1I9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trav2Q5R1I9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav2Q5R1I9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trav2Q5R1I9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.7■■□□□ 1.06
Trav2Q5R1I9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trav2Q5R1I9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav2Q5R1I9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav2Q5R1I9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav2Q5R1I9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav2Q5R1I9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav2Q5R1I9 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.58■■□□□ 1.05
Trav2Q5R1I9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav2Q5R1I9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav2Q5R1I9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trav2Q5R1I9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav2Q5R1I9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav2Q5R1I9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.51■■□□□ 1.03
Trav2Q5R1I9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trav2Q5R1I9 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.5■■□□□ 1.03
Trav2Q5R1I9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav2Q5R1I9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav2Q5R1I9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav2Q5R1I9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav2Q5R1I9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.46■■□□□ 1.03
Trav2Q5R1I9 Gm24804-201ENSMUST00000174982 85 ntBASIC21.45■■□□□ 1.02
Trav2Q5R1I9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.45■■□□□ 1.02
Trav2Q5R1I9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav2Q5R1I9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav2Q5R1I9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.39■■□□□ 1.01
Trav2Q5R1I9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.39■■□□□ 1.01
Trav2Q5R1I9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.38■■□□□ 1.01
Trav2Q5R1I9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav2Q5R1I9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trav2Q5R1I9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trav2Q5R1I9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trav2Q5R1I9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav2Q5R1I9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trav2Q5R1I9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trav2Q5R1I9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trav2Q5R1I9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav2Q5R1I9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav2Q5R1I9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trav2Q5R1I9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav2Q5R1I9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trav2Q5R1I9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trav2Q5R1I9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav2Q5R1I9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trav2Q5R1I9 Mipep-204ENSMUST00000225043 1548 ntBASIC21.15■□□□□ 0.98
Trav2Q5R1I9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav2Q5R1I9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trav2Q5R1I9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav2Q5R1I9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trav2Q5R1I9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav2Q5R1I9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav2Q5R1I9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.09■□□□□ 0.97
Trav2Q5R1I9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav2Q5R1I9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav2Q5R1I9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav2Q5R1I9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trav2Q5R1I9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trav2Q5R1I9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav2Q5R1I9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav2Q5R1I9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav2Q5R1I9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav2Q5R1I9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav2Q5R1I9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trav2Q5R1I9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Trav2Q5R1I9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav2Q5R1I9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav2Q5R1I9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav2Q5R1I9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav2Q5R1I9 Gm16148-201ENSMUST00000119653 893 ntBASIC20.97■□□□□ 0.95
Trav2Q5R1I9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms