Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22,21■■□□□ 1,15
Trav2Q5R1I9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22,21■■□□□ 1,15
Trav2Q5R1I9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Trav2Q5R1I9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22,19■■□□□ 1,14
Trav2Q5R1I9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Trav2Q5R1I9 Gm8109-201ENSMUST00000194076 746 ntBASIC22,14■■□□□ 1,13
Trav2Q5R1I9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22,13■■□□□ 1,13
Trav2Q5R1I9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22,09■■□□□ 1,13
Trav2Q5R1I9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22,07■■□□□ 1,12
Trav2Q5R1I9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,12
Trav2Q5R1I9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,11
Trav2Q5R1I9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21,99■■□□□ 1,11
Trav2Q5R1I9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Trav2Q5R1I9 Gm17082-201ENSMUST00000166043 1091 ntBASIC21,98■■□□□ 1,11
Trav2Q5R1I9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Trav2Q5R1I9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Trav2Q5R1I9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21,96■■□□□ 1,11
Trav2Q5R1I9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21,95■■□□□ 1,1
Trav2Q5R1I9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Trav2Q5R1I9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Trav2Q5R1I9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Trav2Q5R1I9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21,91■■□□□ 1,1
Trav2Q5R1I9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Trav2Q5R1I9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21,89■■□□□ 1,09
Trav2Q5R1I9 Gm27322-201ENSMUST00000184007 104 ntBASIC21,88■■□□□ 1,09
Trav2Q5R1I9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Trav2Q5R1I9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21,86■■□□□ 1,09
Trav2Q5R1I9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,81■■□□□ 1,08
Trav2Q5R1I9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21,71■■□□□ 1,07
Trav2Q5R1I9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21,7■■□□□ 1,06
Trav2Q5R1I9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21,7■■□□□ 1,06
Trav2Q5R1I9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21,65■■□□□ 1,06
Trav2Q5R1I9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Trav2Q5R1I9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21,64■■□□□ 1,05
Trav2Q5R1I9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21,63■■□□□ 1,05
Trav2Q5R1I9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Trav2Q5R1I9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,59■■□□□ 1,05
Trav2Q5R1I9 AL845457.1-201ENSMUST00000197244 68 ntBASIC21,58■■□□□ 1,05
Trav2Q5R1I9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21,55■■□□□ 1,04
Trav2Q5R1I9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21,54■■□□□ 1,04
Trav2Q5R1I9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,53■■□□□ 1,04
Trav2Q5R1I9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21,53■■□□□ 1,04
Trav2Q5R1I9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,52■■□□□ 1,04
Trav2Q5R1I9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21,51■■□□□ 1,03
Trav2Q5R1I9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21,51■■□□□ 1,03
Trav2Q5R1I9 Zfp131-207ENSMUST00000224946 1783 ntBASIC21,5■■□□□ 1,03
Trav2Q5R1I9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21,49■■□□□ 1,03
Trav2Q5R1I9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Trav2Q5R1I9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21,48■■□□□ 1,03
Trav2Q5R1I9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Trav2Q5R1I9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21,46■■□□□ 1,03
Trav2Q5R1I9 Gm24804-201ENSMUST00000174982 85 ntBASIC21,45■■□□□ 1,02
Trav2Q5R1I9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21,45■■□□□ 1,02
Trav2Q5R1I9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Trav2Q5R1I9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Trav2Q5R1I9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21,39■■□□□ 1,01
Trav2Q5R1I9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21,39■■□□□ 1,01
Trav2Q5R1I9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,38■■□□□ 1,01
Trav2Q5R1I9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Trav2Q5R1I9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21,32■■□□□ 1
Trav2Q5R1I9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,31■■□□□ 1
Trav2Q5R1I9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21,29■■□□□ 1
Trav2Q5R1I9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Trav2Q5R1I9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21,28■■□□□ 1
Trav2Q5R1I9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Trav2Q5R1I9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Trav2Q5R1I9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trav2Q5R1I9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trav2Q5R1I9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,23■□□□□ 0,99
Trav2Q5R1I9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Trav2Q5R1I9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21,22■□□□□ 0,99
Trav2Q5R1I9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Trav2Q5R1I9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Trav2Q5R1I9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21,16■□□□□ 0,98
Trav2Q5R1I9 Mipep-204ENSMUST00000225043 1548 ntBASIC21,15■□□□□ 0,98
Trav2Q5R1I9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21,15■□□□□ 0,98
Trav2Q5R1I9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21,15■□□□□ 0,98
Trav2Q5R1I9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,98
Trav2Q5R1I9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,14■□□□□ 0,97
Trav2Q5R1I9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Trav2Q5R1I9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Trav2Q5R1I9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21,09■□□□□ 0,97
Trav2Q5R1I9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,08■□□□□ 0,97
Trav2Q5R1I9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Trav2Q5R1I9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21,08■□□□□ 0,97
Trav2Q5R1I9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,96
Trav2Q5R1I9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21,07■□□□□ 0,96
Trav2Q5R1I9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,06■□□□□ 0,96
Trav2Q5R1I9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21,04■□□□□ 0,96
Trav2Q5R1I9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21,04■□□□□ 0,96
Trav2Q5R1I9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21,04■□□□□ 0,96
Trav2Q5R1I9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21,03■□□□□ 0,96
Trav2Q5R1I9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21,02■□□□□ 0,96
Trav2Q5R1I9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21,02■□□□□ 0,95
Trav2Q5R1I9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Trav2Q5R1I9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Trav2Q5R1I9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,97■□□□□ 0,95
Trav2Q5R1I9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20,97■□□□□ 0,95
Trav2Q5R1I9 Gm16148-201ENSMUST00000119653 893 ntBASIC20,97■□□□□ 0,95
Trav2Q5R1I9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20,97■□□□□ 0,95
Retrieved 100 of 76,532 protein–RNA pairs in 10,7 ms