Protein–RNA interactions for Protein: Q3U587

Gm10842, Predicted gene 10842 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10842Q3U587 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm10842Q3U587 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm10842Q3U587 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm10842Q3U587 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm10842Q3U587 Gm15042-201ENSMUST00000120212 883 ntBASIC20.48■□□□□ 0.87
Gm10842Q3U587 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm10842Q3U587 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm10842Q3U587 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm10842Q3U587 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm10842Q3U587 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm10842Q3U587 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gm10842Q3U587 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm10842Q3U587 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10842Q3U587 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10842Q3U587 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.27■□□□□ 0.83
Gm10842Q3U587 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm10842Q3U587 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm10842Q3U587 Gm15045-201ENSMUST00000117359 883 ntBASIC20.24■□□□□ 0.83
Gm10842Q3U587 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10842Q3U587 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm10842Q3U587 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm10842Q3U587 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm10842Q3U587 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10842Q3U587 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm10842Q3U587 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.15■□□□□ 0.82
Gm10842Q3U587 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm10842Q3U587 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm10842Q3U587 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.1■□□□□ 0.81
Gm10842Q3U587 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm10842Q3U587 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm10842Q3U587 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm10842Q3U587 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm10842Q3U587 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm10842Q3U587 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10842Q3U587 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10842Q3U587 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm10842Q3U587 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm10842Q3U587 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10842Q3U587 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.99■□□□□ 0.79
Gm10842Q3U587 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10842Q3U587 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm10842Q3U587 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm10842Q3U587 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10842Q3U587 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm10842Q3U587 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Gm10842Q3U587 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10842Q3U587 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10842Q3U587 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Gm10842Q3U587 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10842Q3U587 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10842Q3U587 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.9■□□□□ 0.78
Gm10842Q3U587 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
Gm10842Q3U587 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm10842Q3U587 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm10842Q3U587 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Gm10842Q3U587 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm10842Q3U587 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm10842Q3U587 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm10842Q3U587 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.82■□□□□ 0.76
Gm10842Q3U587 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10842Q3U587 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Gm10842Q3U587 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Gm10842Q3U587 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Gm10842Q3U587 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm10842Q3U587 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Gm10842Q3U587 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10842Q3U587 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10842Q3U587 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10842Q3U587 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10842Q3U587 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm10842Q3U587 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm10842Q3U587 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm10842Q3U587 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10842Q3U587 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10842Q3U587 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm10842Q3U587 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm10842Q3U587 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm10842Q3U587 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10842Q3U587 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10842Q3U587 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10842Q3U587 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm10842Q3U587 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm10842Q3U587 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gm10842Q3U587 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm10842Q3U587 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm10842Q3U587 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gm10842Q3U587 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10842Q3U587 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10842Q3U587 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10842Q3U587 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gm10842Q3U587 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm10842Q3U587 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm10842Q3U587 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm10842Q3U587 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm10842Q3U587 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm10842Q3U587 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm10842Q3U587 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm10842Q3U587 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Gm10842Q3U587 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm10842Q3U587 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 917 ms