Protein–RNA interactions for Protein: P40890

VTH2, VPS10 homolog 2, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH2P40890 IMP2'YIL154C 1041 nt19.2■□□□□ 0.66
VTH2P40890 SPP1YPL138C 1062 nt19.18■□□□□ 0.66
VTH2P40890 CCT6YDR188W 1641 nt19.12■□□□□ 0.65
VTH2P40890 UBX6YJL048C 1191 nt19.1■□□□□ 0.65
VTH2P40890 YEL076C-AYEL076C-A 651 nt19.05■□□□□ 0.64
VTH2P40890 YEL076CYEL076C 651 nt19.05■□□□□ 0.64
VTH2P40890 YJL152WYJL152W 360 nt19.05■□□□□ 0.64
VTH2P40890 YLR464WYLR464W 651 nt19.05■□□□□ 0.64
VTH2P40890 RTG1YOL067C 534 nt19.03■□□□□ 0.64
VTH2P40890 ERV46YAL042W 1248 nt19■□□□□ 0.63
VTH2P40890 ADO1YJR105W 1023 nt18.98■□□□□ 0.63
VTH2P40890 IDH1YNL037C 1083 nt18.9■□□□□ 0.62
VTH2P40890 ALF1YNL148C 765 nt18.89■□□□□ 0.61
VTH2P40890 SUF2tP(AGG)C 72 nt18.86■□□□□ 0.61
VTH2P40890 SUF10tP(AGG)N 72 nt18.86■□□□□ 0.61
VTH2P40890 YDR433WYDR433W 441 nt18.84■□□□□ 0.61
VTH2P40890 MXR2YCL033C 507 nt18.79■□□□□ 0.6
VTH2P40890 SIS1YNL007C 1059 nt18.77■□□□□ 0.6
VTH2P40890 TIR4YOR009W 1464 nt18.74■□□□□ 0.59
VTH2P40890 YDR095CYDR095C 411 nt18.69■□□□□ 0.58
VTH2P40890 GBP2YCL011C 1284 nt18.64■□□□□ 0.58
VTH2P40890 YPS1YLR120C 1710 nt18.62■□□□□ 0.57
VTH2P40890 YKR040CYKR040C 504 nt18.59■□□□□ 0.57
VTH2P40890 YDR094WYDR094W 336 nt18.52■□□□□ 0.56
VTH2P40890 HUA1YGR268C 597 nt18.45■□□□□ 0.54
VTH2P40890 YFL015W-AYFL015W-A 318 nt18.44■□□□□ 0.54
VTH2P40890 YHR165W-AYHR165W-A 312 nt18.44■□□□□ 0.54
VTH2P40890 YCL048W-AYCL048W-A 240 nt18.39■□□□□ 0.54
VTH2P40890 PTH1YHR189W 573 nt18.36■□□□□ 0.53
VTH2P40890 ART5YGR068C 1761 nt18.3■□□□□ 0.52
VTH2P40890 TCD2YKL027W 1344 nt18.29■□□□□ 0.52
VTH2P40890 YMR057CYMR057C 372 nt18.28■□□□□ 0.52
VTH2P40890 CAC2YML102W 1407 nt18.27■□□□□ 0.51
VTH2P40890 FRD1YEL047C 1413 nt18.24■□□□□ 0.51
VTH2P40890 GFD2YCL036W 1701 nt18.23■□□□□ 0.51
VTH2P40890 RPP2AYOL039W 321 nt18.23■□□□□ 0.51
VTH2P40890 PTP1YDL230W 1008 nt18.14■□□□□ 0.49
VTH2P40890 DED1YOR204W 1815 nt18.14■□□□□ 0.49
VTH2P40890 RTS2YOR077W 699 nt18.12■□□□□ 0.49
VTH2P40890 SBA1YKL117W 651 nt18.06■□□□□ 0.48
VTH2P40890 PET9YBL030C 957 nt18.06■□□□□ 0.48
VTH2P40890 RRD1YIL153W 1182 nt18.05■□□□□ 0.48
VTH2P40890 PAU16YKL224C 372 nt18.03■□□□□ 0.48
VTH2P40890 SOR2YDL246C 1074 nt17.99■□□□□ 0.47
VTH2P40890 SOR1YJR159W 1074 nt17.99■□□□□ 0.47
VTH2P40890 YKL030WYKL030W 606 nt17.98■□□□□ 0.47
VTH2P40890 YCL042WYCL042W 360 nt17.97■□□□□ 0.47
VTH2P40890 LCB1YMR296C 1677 nt17.96■□□□□ 0.47
VTH2P40890 YLR235CYLR235C 399 nt17.96■□□□□ 0.47
VTH2P40890 FPS1YLL043W 2010 nt17.91■□□□□ 0.46
VTH2P40890 FMT1YBL013W 1206 nt17.9■□□□□ 0.46
VTH2P40890 PRE6YOL038W 765 nt17.88■□□□□ 0.45
VTH2P40890 MEP2YNL142W 1500 nt17.87■□□□□ 0.45
VTH2P40890 DCW1YKL046C 1350 nt17.82■□□□□ 0.44
VTH2P40890 YFR018CYFR018C 1092 nt17.71■□□□□ 0.43
VTH2P40890 tL(GAG)GtL(GAG)G 82 nt17.67■□□□□ 0.42
VTH2P40890 CWP1YKL096W 720 nt17.67■□□□□ 0.42
VTH2P40890 TIM23YNR017W 669 nt17.66■□□□□ 0.42
VTH2P40890 CUE1YMR264W 612 nt17.64■□□□□ 0.41
VTH2P40890 IRC15YPL017C 1500 nt17.62■□□□□ 0.41
VTH2P40890 DIC1YLR348C 897 nt17.61■□□□□ 0.41
VTH2P40890 RRT5YFR032C 870 nt17.58■□□□□ 0.41
VTH2P40890 ADH2YMR303C 1047 nt17.57■□□□□ 0.4
VTH2P40890 FMP52YER004W 696 nt17.54■□□□□ 0.4
VTH2P40890 YLR179CYLR179C 606 nt17.52■□□□□ 0.4
VTH2P40890 EMI2YDR516C 1503 nt17.51■□□□□ 0.39
VTH2P40890 SNF6YHL025W 999 nt17.48■□□□□ 0.39
VTH2P40890 SPT5YML010W 3192 nt17.48■□□□□ 0.39
VTH2P40890 YDL221WYDL221W 552 nt17.43■□□□□ 0.38
VTH2P40890 YIL100WYIL100W 354 nt17.4■□□□□ 0.38
VTH2P40890 GIS3YLR094C 1509 nt17.37■□□□□ 0.37
VTH2P40890 YPR064WYPR064W 420 nt17.36■□□□□ 0.37
VTH2P40890 WSC2YNL283C 1512 nt17.34■□□□□ 0.37
VTH2P40890 PEX25YPL112C 1185 nt17.31■□□□□ 0.36
VTH2P40890 YFL066CYFL066C 1179 nt17.29■□□□□ 0.36
VTH2P40890 TAD3YLR316C 969 nt17.26■□□□□ 0.35
VTH2P40890 PCM1YEL058W 1674 nt17.23■□□□□ 0.35
VTH2P40890 NAT4YMR069W 858 nt17.19■□□□□ 0.34
VTH2P40890 YIH1YCR059C 777 nt17.16■□□□□ 0.34
VTH2P40890 AHT1YHR093W 549 nt17.12■□□□□ 0.33
VTH2P40890 RNQ1YCL028W 1218 nt17.12■□□□□ 0.33
VTH2P40890 YNL115CYNL115C 1935 nt17.08■□□□□ 0.32
VTH2P40890 GLK1YCL040W 1503 nt17.08■□□□□ 0.32
VTH2P40890 YMR090WYMR090W 684 nt17.07■□□□□ 0.32
VTH2P40890 SCC4YER147C 1875 nt17.07■□□□□ 0.32
VTH2P40890 SDH1YKL148C 1923 nt17.04■□□□□ 0.32
VTH2P40890 YSC84YHR016C 1407 nt17.03■□□□□ 0.32
VTH2P40890 YSP3YOR003W 1437 nt17.03■□□□□ 0.32
VTH2P40890 MSF1YPR047W 1410 nt17.01■□□□□ 0.31
VTH2P40890 BDH1YAL060W 1149 nt17■□□□□ 0.31
VTH2P40890 YLL053CYLL053C 459 nt17■□□□□ 0.31
VTH2P40890 MIR1YJR077C 936 nt16.98■□□□□ 0.31
VTH2P40890 BIO4YNR057C 714 nt16.97■□□□□ 0.31
VTH2P40890 FTR1YER145C 1215 nt16.94■□□□□ 0.3
VTH2P40890 YLR415CYLR415C 339 nt16.92■□□□□ 0.3
VTH2P40890 THI74YDR438W 1113 nt16.88■□□□□ 0.29
VTH2P40890 AQY1YPR192W 918 nt16.87■□□□□ 0.29
VTH2P40890 GAL1YBR020W 1587 nt16.87■□□□□ 0.29
VTH2P40890 YMR244WYMR244W 1068 nt16.86■□□□□ 0.29
VTH2P40890 TRM5YHR070W 1500 nt16.85■□□□□ 0.29
Retrieved 100 of 7,029 protein–RNA pairs in 40.6 ms