Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Igkv1-117A0A140T8M0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv1-117A0A140T8M0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv1-117A0A140T8M0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv1-117A0A140T8M0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv1-117A0A140T8M0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv1-117A0A140T8M0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv1-117A0A140T8M0 Gm23366-201ENSMUST00000175022 89 ntBASIC17.91■□□□□ 0.46
Igkv1-117A0A140T8M0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Igkv1-117A0A140T8M0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.88■□□□□ 0.45
Igkv1-117A0A140T8M0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv1-117A0A140T8M0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv1-117A0A140T8M0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.82■□□□□ 0.44
Igkv1-117A0A140T8M0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv1-117A0A140T8M0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv1-117A0A140T8M0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv1-117A0A140T8M0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv1-117A0A140T8M0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Igkv1-117A0A140T8M0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv1-117A0A140T8M0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv1-117A0A140T8M0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv1-117A0A140T8M0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv1-117A0A140T8M0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv1-117A0A140T8M0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv1-117A0A140T8M0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Igkv1-117A0A140T8M0 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.65■□□□□ 0.42
Igkv1-117A0A140T8M0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv1-117A0A140T8M0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv1-117A0A140T8M0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv1-117A0A140T8M0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.62■□□□□ 0.41
Igkv1-117A0A140T8M0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv1-117A0A140T8M0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv1-117A0A140T8M0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.56■□□□□ 0.4
Igkv1-117A0A140T8M0 Zxda-201ENSMUST00000117281 2621 ntBASIC17.56■□□□□ 0.4
Igkv1-117A0A140T8M0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv1-117A0A140T8M0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv1-117A0A140T8M0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv1-117A0A140T8M0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.52■□□□□ 0.39
Igkv1-117A0A140T8M0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Igkv1-117A0A140T8M0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv1-117A0A140T8M0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.51■□□□□ 0.39
Igkv1-117A0A140T8M0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv1-117A0A140T8M0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv1-117A0A140T8M0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.46■□□□□ 0.39
Igkv1-117A0A140T8M0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-117A0A140T8M0 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.45■□□□□ 0.38
Igkv1-117A0A140T8M0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv1-117A0A140T8M0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-117A0A140T8M0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Igkv1-117A0A140T8M0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-117A0A140T8M0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-117A0A140T8M0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-117A0A140T8M0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-117A0A140T8M0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-117A0A140T8M0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-117A0A140T8M0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-117A0A140T8M0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-117A0A140T8M0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv1-117A0A140T8M0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv1-117A0A140T8M0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv1-117A0A140T8M0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.35■□□□□ 0.37
Igkv1-117A0A140T8M0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv1-117A0A140T8M0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv1-117A0A140T8M0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv1-117A0A140T8M0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv1-117A0A140T8M0 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.29■□□□□ 0.36
Igkv1-117A0A140T8M0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv1-117A0A140T8M0 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.28■□□□□ 0.36
Igkv1-117A0A140T8M0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv1-117A0A140T8M0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv1-117A0A140T8M0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv1-117A0A140T8M0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv1-117A0A140T8M0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv1-117A0A140T8M0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv1-117A0A140T8M0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv1-117A0A140T8M0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv1-117A0A140T8M0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv1-117A0A140T8M0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv1-117A0A140T8M0 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.21■□□□□ 0.35
Igkv1-117A0A140T8M0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv1-117A0A140T8M0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv1-117A0A140T8M0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv1-117A0A140T8M0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv1-117A0A140T8M0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv1-117A0A140T8M0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv1-117A0A140T8M0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv1-117A0A140T8M0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv1-117A0A140T8M0 Gm27325-201ENSMUST00000175467 74 ntBASIC17.17■□□□□ 0.34
Igkv1-117A0A140T8M0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv1-117A0A140T8M0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv1-117A0A140T8M0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv1-117A0A140T8M0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Igkv1-117A0A140T8M0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv1-117A0A140T8M0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv1-117A0A140T8M0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv1-117A0A140T8M0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv1-117A0A140T8M0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Igkv1-117A0A140T8M0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv1-117A0A140T8M0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.11■□□□□ 0.33
Igkv1-117A0A140T8M0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms