Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpl13a-ps1A0A140T8K2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Rpl13a-ps1A0A140T8K2 Gm27322-201ENSMUST00000184007 104 ntBASIC23■■□□□ 1.27
Rpl13a-ps1A0A140T8K2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpl13a-ps1A0A140T8K2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpl13a-ps1A0A140T8K2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Rpl13a-ps1A0A140T8K2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.93■■□□□ 1.26
Rpl13a-ps1A0A140T8K2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rpl13a-ps1A0A140T8K2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpl13a-ps1A0A140T8K2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpl13a-ps1A0A140T8K2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rpl13a-ps1A0A140T8K2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.88■■□□□ 1.25
Rpl13a-ps1A0A140T8K2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpl13a-ps1A0A140T8K2 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.85■■□□□ 1.25
Rpl13a-ps1A0A140T8K2 Gm24804-201ENSMUST00000174982 85 ntBASIC22.83■■□□□ 1.25
Rpl13a-ps1A0A140T8K2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpl13a-ps1A0A140T8K2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpl13a-ps1A0A140T8K2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rpl13a-ps1A0A140T8K2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpl13a-ps1A0A140T8K2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.72■■□□□ 1.23
Rpl13a-ps1A0A140T8K2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.72■■□□□ 1.23
Rpl13a-ps1A0A140T8K2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rpl13a-ps1A0A140T8K2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpl13a-ps1A0A140T8K2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpl13a-ps1A0A140T8K2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.66■■□□□ 1.22
Rpl13a-ps1A0A140T8K2 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.64■■□□□ 1.21
Rpl13a-ps1A0A140T8K2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rpl13a-ps1A0A140T8K2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpl13a-ps1A0A140T8K2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpl13a-ps1A0A140T8K2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Rpl13a-ps1A0A140T8K2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Rpl13a-ps1A0A140T8K2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpl13a-ps1A0A140T8K2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpl13a-ps1A0A140T8K2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpl13a-ps1A0A140T8K2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.46■■□□□ 1.19
Rpl13a-ps1A0A140T8K2 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.46■■□□□ 1.19
Rpl13a-ps1A0A140T8K2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpl13a-ps1A0A140T8K2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpl13a-ps1A0A140T8K2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpl13a-ps1A0A140T8K2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rpl13a-ps1A0A140T8K2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rpl13a-ps1A0A140T8K2 Zfp131-205ENSMUST00000223812 663 ntBASIC22.39■■□□□ 1.17
Rpl13a-ps1A0A140T8K2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpl13a-ps1A0A140T8K2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rpl13a-ps1A0A140T8K2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpl13a-ps1A0A140T8K2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rpl13a-ps1A0A140T8K2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpl13a-ps1A0A140T8K2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rpl13a-ps1A0A140T8K2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.31■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.31■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.3■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rpl13a-ps1A0A140T8K2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpl13a-ps1A0A140T8K2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpl13a-ps1A0A140T8K2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpl13a-ps1A0A140T8K2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpl13a-ps1A0A140T8K2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpl13a-ps1A0A140T8K2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpl13a-ps1A0A140T8K2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpl13a-ps1A0A140T8K2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rpl13a-ps1A0A140T8K2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rpl13a-ps1A0A140T8K2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rpl13a-ps1A0A140T8K2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rpl13a-ps1A0A140T8K2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rpl13a-ps1A0A140T8K2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.11■■□□□ 1.13
Rpl13a-ps1A0A140T8K2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rpl13a-ps1A0A140T8K2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rpl13a-ps1A0A140T8K2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rpl13a-ps1A0A140T8K2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.08■■□□□ 1.13
Rpl13a-ps1A0A140T8K2 Gm16148-201ENSMUST00000119653 893 ntBASIC22.07■■□□□ 1.12
Rpl13a-ps1A0A140T8K2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpl13a-ps1A0A140T8K2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rpl13a-ps1A0A140T8K2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.99■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rpl13a-ps1A0A140T8K2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.93■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.91■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rpl13a-ps1A0A140T8K2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.87■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms