Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RCL1Q9Y2P8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.15□□□□□ -0.31
RCL1Q9Y2P8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RCL1Q9Y2P8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.15□□□□□ -0.31
RCL1Q9Y2P8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 AC005412.3-201ENST00000580309 715 ntBASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 AL589182.2-201ENST00000619332 1049 ntBASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 AGAP7P-201ENST00000582299 2062 ntBASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 AGAP14-201ENST00000624701 2060 ntBASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RCL1Q9Y2P8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AL390755.1-201ENST00000623716 2027 ntBASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 ST20-AS1-201ENST00000560255 4223 ntBASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AC005840.4-201ENST00000541242 2494 ntBASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AC104076.2-201ENST00000448912 469 ntBASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AC074051.2-201ENST00000565115 352 ntBASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms