Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC012454.1-201ENST00000443948 995 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 DEFT1P-201ENST00000453425 496 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC093534.1-201ENST00000504977 132 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 ACTG1P17-201ENST00000558391 1119 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 MTATP6P25-201ENST00000574491 261 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 RN7SL560P-201ENST00000577943 264 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC005520.3-201ENST00000602874 370 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AP001350.2-201ENST00000625104 1094 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC022211.2-201ENST00000585075 2527 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LHX6Q9UPM6 AC068418.2-201ENST00000577309 3703 ntBASIC15.24■□□□□ 0.03
LHX6Q9UPM6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AC104306.2-201ENST00000451877 341 ntBASIC15.23■□□□□ 0.03
LHX6Q9UPM6 EIF4HP1-201ENST00000453115 687 ntBASIC15.23■□□□□ 0.03
LHX6Q9UPM6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AC244452.3-201ENST00000636814 210 ntBASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 AC131009.4-201ENST00000624048 1740 ntBASIC15.23■□□□□ 0.03
LHX6Q9UPM6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LHX6Q9UPM6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms