Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 TCAF2P1-201ENST00000291129 2421 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AL031133.1-201ENST00000406807 723 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 NUS1P2-201ENST00000417358 873 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AC026396.1-201ENST00000419388 421 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AP002383.4-201ENST00000442518 975 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AC087163.2-201ENST00000457299 853 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AP000867.3-201ENST00000524675 377 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AP001350.2-201ENST00000625104 1094 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 PGM5P2-202ENST00000637225 1043 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 AC139749.1-202ENST00000617529 3139 ntBASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SND1-IT1Q9HBX3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 AP005117.1-201ENST00000584346 1413 ntBASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 AC007686.3-201ENST00000619017 3487 ntBASIC10.77□□□□□ -0.68
SND1-IT1Q9HBX3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 POR-201ENST00000394893 2532 ntTSL 5 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 CDK2AP2P3-201ENST00000422476 372 ntBASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC10.77□□□□□ -0.69
SND1-IT1Q9HBX3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms