Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 AC092474.2-201ENST00000424288 719 ntBASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 RNA5SP415-201ENST00000517246 115 ntBASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 AC096734.2-201ENST00000562054 433 ntBASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 AC018892.3-201ENST00000623986 2499 ntBASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HDHD3Q9BSH5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 RHOQP3-201ENST00000437982 621 ntBASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 AC002347.1-201ENST00000569543 541 ntBASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 RN7SL510P-201ENST00000581311 263 ntBASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 MIR4321-201ENST00000592276 80 ntBASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HDHD3Q9BSH5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms