Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 AC011477.6-201ENST00000604980 1927 ntBASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 MIR648-201ENST00000385046 94 ntBASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 BTBD6P1-201ENST00000412176 1267 ntBASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 CALR4P-201ENST00000431943 946 ntBASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 FZD10-202ENST00000539839 3282 ntBASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 KRT8P35-201ENST00000483942 1338 ntBASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 CD8B2-202ENST00000417670 633 ntBASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 RNA5SP486-201ENST00000515961 83 ntBASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 AL008638.5-201ENST00000623814 1298 ntBASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 AC006453.4-201ENST00000636949 1252 ntBASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.27■□□□□ 0.68
CRAMP1Q96RY5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.27■□□□□ 0.67
CRAMP1Q96RY5 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 AC006449.6-201ENST00000612330 2296 ntBASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CRAMP1Q96RY5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms