Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 AC006538.1-201ENST00000567905 1585 ntBASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 HLA-J-202ENST00000469281 1241 ntBASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 IGHV3-42-201ENST00000520410 361 ntBASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 MIR4745-201ENST00000577608 62 ntBASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSMEM1Q8WWF3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AC008677.1-201ENST00000519230 1561 ntBASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 MTHFR-217ENST00000641820 1569 ntBASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AL512638.1-201ENST00000457493 794 ntBASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AC069120.2-201ENST00000524091 540 ntBASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AL158211.3-201ENST00000607385 239 ntBASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms