Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 AL136982.4-201ENST00000437689 1740 ntBASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF440Q8IYI8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 AC211486.1-202ENST00000416371 468 ntBASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 PHKG1P2-201ENST00000457537 863 ntBASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 AC211476.1-201ENST00000503899 468 ntBASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF440Q8IYI8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 AL035456.1-201ENST00000456064 1369 ntBASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 RBPMS2P1-201ENST00000437762 623 ntBASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 AC009093.7-201ENST00000623853 1223 ntBASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 AC020658.6-201ENST00000623564 1870 ntBASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF440Q8IYI8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms