Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 AC018695.7-201ENST00000624587 2492 ntBASIC17.23■□□□□ 0.35
HERC6Q8IVU3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AL139384.1-201ENST00000612143 3047 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC004987.2-201ENST00000395959 1148 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC092506.1-202ENST00000401022 528 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 BAATP1-201ENST00000412284 1225 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC074338.1-201ENST00000416825 156 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC016694.1-201ENST00000434179 700 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 RPL13AP25-201ENST00000484130 612 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC009486.1-201ENST00000569860 813 ntBASIC17.22■□□□□ 0.35
HERC6Q8IVU3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC6Q8IVU3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 AC026954.1-201ENST00000429771 1293 ntBASIC17.21■□□□□ 0.35
HERC6Q8IVU3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 EEF1DP4-201ENST00000446006 880 ntBASIC17.21■□□□□ 0.35
HERC6Q8IVU3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 C2orf69P2-201ENST00000562032 1123 ntBASIC17.21■□□□□ 0.35
HERC6Q8IVU3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 AC091271.1-201ENST00000611877 1162 ntBASIC17.21■□□□□ 0.35
HERC6Q8IVU3 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC6Q8IVU3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HERC6Q8IVU3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HERC6Q8IVU3 AL691432.1-201ENST00000596308 1422 ntBASIC17.21■□□□□ 0.34
HERC6Q8IVU3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms