Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 LAGE3P1-201ENST00000425356 484 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 SART3-203ENST00000546611 1184 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 AC087388.1-201ENST00000571370 1112 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 AC092119.3-201ENST00000612618 583 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 AC012569.1-201ENST00000591191 1524 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 AC006486.2-201ENST00000624246 2199 ntBASIC14.39□□□□□ -0.11
CCDC58Q4VC31 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 HAUS4P1-201ENST00000406739 1145 ntBASIC14.38□□□□□ -0.11
CCDC58Q4VC31 ELK2BP-201ENST00000415014 1224 ntBASIC14.38□□□□□ -0.11
CCDC58Q4VC31 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 RPS15P9-201ENST00000494093 319 ntBASIC14.38□□□□□ -0.11
CCDC58Q4VC31 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC58Q4VC31 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.38□□□□□ -0.11
CCDC58Q4VC31 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 AC011477.6-201ENST00000604980 1927 ntBASIC14.37□□□□□ -0.11
CCDC58Q4VC31 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC58Q4VC31 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms