Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.98■□□□□ 0.63
PDS5AQ29RF7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 OR6D1P-202ENST00000641007 5290 ntBASIC18.97■□□□□ 0.63
PDS5AQ29RF7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 DRD5P1-201ENST00000456605 1438 ntBASIC18.97■□□□□ 0.63
PDS5AQ29RF7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 C1QBPP1-201ENST00000400117 770 ntBASIC18.97■□□□□ 0.63
PDS5AQ29RF7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.97■□□□□ 0.63
PDS5AQ29RF7 RAB43P1-201ENST00000561790 589 ntBASIC18.97■□□□□ 0.63
PDS5AQ29RF7 AL603832.2-201ENST00000566195 2125 ntBASIC18.97■□□□□ 0.63
PDS5AQ29RF7 AC233724.13-201ENST00000598383 410 ntBASIC18.97■□□□□ 0.63
PDS5AQ29RF7 MIR6752-201ENST00000618442 71 ntBASIC18.97■□□□□ 0.63
PDS5AQ29RF7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 BTNL10-201ENST00000595971 695 ntBASIC18.96■□□□□ 0.63
PDS5AQ29RF7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PDS5AQ29RF7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 BOLA2P3-201ENST00000404566 256 ntBASIC18.95■□□□□ 0.62
PDS5AQ29RF7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.95■□□□□ 0.62
PDS5AQ29RF7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 CLUHP6-201ENST00000580789 941 ntBASIC18.95■□□□□ 0.62
PDS5AQ29RF7 AC093813.1-201ENST00000605066 256 ntBASIC18.95■□□□□ 0.62
PDS5AQ29RF7 AC017083.2-201ENST00000608069 979 ntBASIC18.95■□□□□ 0.62
PDS5AQ29RF7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDS5AQ29RF7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms