Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.3■□□□□ 0.04
CLDN6P56747 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CLDN6P56747 AC068587.3-201ENST00000526613 355 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN6P56747 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN6P56747 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN6P56747 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN6P56747 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN6P56747 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 TNRC18P3-201ENST00000441896 2691 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN6P56747 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN6P56747 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN6P56747 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN6P56747 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 RPL13AP20-201ENST00000459725 609 ntBASIC15.29■□□□□ 0.04
CLDN6P56747 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN6P56747 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.29■□□□□ 0.04
CLDN6P56747 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN6P56747 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.29■□□□□ 0.04
CLDN6P56747 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN6P56747 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN6P56747 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN6P56747 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN6P56747 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CLDN6P56747 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN6P56747 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN6P56747 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN6P56747 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
CLDN6P56747 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.29■□□□□ 0.04
CLDN6P56747 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN6P56747 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDN6P56747 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 NFIC-211ENST00000641145 8399 ntBASIC15.29■□□□□ 0.04
CLDN6P56747 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN6P56747 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN6P56747 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN6P56747 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN6P56747 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN6P56747 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLDN6P56747 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.28■□□□□ 0.04
CLDN6P56747 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN6P56747 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 AC026954.1-201ENST00000429771 1293 ntBASIC15.28■□□□□ 0.04
CLDN6P56747 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CLDN6P56747 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 AC106760.1-201ENST00000508690 800 ntBASIC15.28■□□□□ 0.04
CLDN6P56747 RNA5SP412-201ENST00000516234 123 ntBASIC15.28■□□□□ 0.04
CLDN6P56747 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.28■□□□□ 0.04
CLDN6P56747 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.28■□□□□ 0.04
CLDN6P56747 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN6P56747 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN6P56747 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms