Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PKNOX1P55347 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PKNOX1P55347 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PKNOX1P55347 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PKNOX1P55347 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PKNOX1P55347 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PKNOX1P55347 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PKNOX1P55347 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.75■□□□□ 0.11
PKNOX1P55347 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PKNOX1P55347 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.74■□□□□ 0.11
PKNOX1P55347 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 PMS2P7-201ENST00000506558 1336 ntBASIC15.74■□□□□ 0.11
PKNOX1P55347 BCAR1-209ENST00000546196 1340 ntBASIC15.74■□□□□ 0.11
PKNOX1P55347 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PKNOX1P55347 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PKNOX1P55347 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.74■□□□□ 0.11
PKNOX1P55347 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
PKNOX1P55347 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PKNOX1P55347 KRT126P-201ENST00000549467 1181 ntBASIC15.74■□□□□ 0.11
PKNOX1P55347 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.74■□□□□ 0.11
PKNOX1P55347 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 AL161645.1-201ENST00000622716 1255 ntBASIC15.74■□□□□ 0.11
PKNOX1P55347 AC004877.2-201ENST00000623941 599 ntBASIC15.74■□□□□ 0.11
PKNOX1P55347 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.74■□□□□ 0.11
PKNOX1P55347 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PKNOX1P55347 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 WASH6P-202ENST00000359512 1437 ntBASIC15.74■□□□□ 0.11
PKNOX1P55347 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PKNOX1P55347 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.74■□□□□ 0.11
PKNOX1P55347 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PKNOX1P55347 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PKNOX1P55347 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.74■□□□□ 0.11
PKNOX1P55347 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.73■□□□□ 0.11
PKNOX1P55347 AP001282.1-201ENST00000531301 1499 ntBASIC15.73■□□□□ 0.11
PKNOX1P55347 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.73■□□□□ 0.11
PKNOX1P55347 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.73■□□□□ 0.11
PKNOX1P55347 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.73■□□□□ 0.11
PKNOX1P55347 PRYP6-201ENST00000514804 343 ntBASIC15.73■□□□□ 0.11
PKNOX1P55347 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.73■□□□□ 0.11
PKNOX1P55347 KRT19P2-202ENST00000557173 1012 ntBASIC15.73■□□□□ 0.11
PKNOX1P55347 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.73■□□□□ 0.11
PKNOX1P55347 AC145285.3-201ENST00000564603 959 ntBASIC15.73■□□□□ 0.11
PKNOX1P55347 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.73■□□□□ 0.11
PKNOX1P55347 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms