Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH12P55289 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH12P55289 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH12P55289 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH12P55289 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH12P55289 AC138035.3-201ENST00000622706 2791 ntBASIC14.96□□□□□ -0.01
CDH12P55289 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH12P55289 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH12P55289 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH12P55289 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH12P55289 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH12P55289 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH12P55289 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.96□□□□□ -0.01
CDH12P55289 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH12P55289 AC109635.5-201ENST00000533593 962 ntBASIC14.96□□□□□ -0.01
CDH12P55289 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.96□□□□□ -0.01
CDH12P55289 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH12P55289 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH12P55289 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH12P55289 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH12P55289 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH12P55289 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH12P55289 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CDH12P55289 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDH12P55289 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.96□□□□□ -0.02
CDH12P55289 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH12P55289 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH12P55289 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH12P55289 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CDH12P55289 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CDH12P55289 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CDH12P55289 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.96□□□□□ -0.02
CDH12P55289 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH12P55289 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.96□□□□□ -0.02
CDH12P55289 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH12P55289 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH12P55289 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
CDH12P55289 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDH12P55289 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH12P55289 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 AC104109.2-201ENST00000602919 1418 ntBASIC14.95□□□□□ -0.02
CDH12P55289 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDH12P55289 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 AC092474.2-201ENST00000424288 719 ntBASIC14.95□□□□□ -0.02
CDH12P55289 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH12P55289 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH12P55289 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CDH12P55289 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH12P55289 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.95□□□□□ -0.02
CDH12P55289 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDH12P55289 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH12P55289 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.95□□□□□ -0.02
CDH12P55289 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH12P55289 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH12P55289 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms