Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 RPS8P6-201ENST00000426177 609 ntBASIC14.59□□□□□ -0.07
HMGA2P52926 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 AC079776.4-201ENST00000511039 504 ntBASIC14.59□□□□□ -0.07
HMGA2P52926 RNA5SP415-201ENST00000517246 115 ntBASIC14.59□□□□□ -0.07
HMGA2P52926 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.59□□□□□ -0.07
HMGA2P52926 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 MIR7706-201ENST00000613747 67 ntBASIC14.59□□□□□ -0.07
HMGA2P52926 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.59□□□□□ -0.07
HMGA2P52926 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.59□□□□□ -0.07
HMGA2P52926 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 FOXO1B-201ENST00000504678 1527 ntBASIC14.59□□□□□ -0.07
HMGA2P52926 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGA2P52926 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HMGA2P52926 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HMGA2P52926 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.58□□□□□ -0.07
HMGA2P52926 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.58□□□□□ -0.07
HMGA2P52926 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.58□□□□□ -0.07
HMGA2P52926 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.58□□□□□ -0.07
HMGA2P52926 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HMGA2P52926 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HMGA2P52926 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.58□□□□□ -0.07
HMGA2P52926 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.58□□□□□ -0.07
HMGA2P52926 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.58□□□□□ -0.07
HMGA2P52926 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HMGA2P52926 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HMGA2P52926 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 AC148477.4-201ENST00000613430 1793 ntBASIC14.58□□□□□ -0.08
HMGA2P52926 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGA2P52926 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGA2P52926 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGA2P52926 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
HMGA2P52926 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
HMGA2P52926 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGA2P52926 AL138918.1-201ENST00000568306 659 ntBASIC14.58□□□□□ -0.08
HMGA2P52926 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 AC004877.2-201ENST00000623941 599 ntBASIC14.58□□□□□ -0.08
HMGA2P52926 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HMGA2P52926 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 FGD5P1-202ENST00000614866 2498 ntBASIC14.58□□□□□ -0.08
HMGA2P52926 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGA2P52926 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HMGA2P52926 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGA2P52926 AC232323.1-201ENST00000540724 2099 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 REXO1L5P-201ENST00000622260 2098 ntBASIC14.57□□□□□ -0.08
HMGA2P52926 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HMGA2P52926 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms