Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF144AP50876 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
RNF144AP50876 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF144AP50876 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF144AP50876 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 RNA5SP410-201ENST00000516285 106 ntBASIC14.93□□□□□ -0.02
RNF144AP50876 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF144AP50876 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF144AP50876 AC022145.2-201ENST00000598203 171 ntBASIC14.93□□□□□ -0.02
RNF144AP50876 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF144AP50876 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 AC005786.4-201ENST00000623369 682 ntBASIC14.93□□□□□ -0.02
RNF144AP50876 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RNF144AP50876 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RNF144AP50876 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RNF144AP50876 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF144AP50876 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF144AP50876 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 AKAP8P1-201ENST00000434743 1349 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNF144AP50876 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF144AP50876 AC142381.1-201ENST00000426099 345 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AC005237.2-201ENST00000434368 219 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 DNAJB3-201ENST00000446806 729 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 RN7SL589P-201ENST00000481268 310 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AC105233.2-201ENST00000523697 349 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AF228730.5-201ENST00000530288 346 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.92□□□□□ -0.02
RNF144AP50876 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.92□□□□□ -0.02
RNF144AP50876 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 AP000842.3-202ENST00000569238 1080 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AKR1B10P2-201ENST00000577332 927 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 MIR3687-2-201ENST00000577708 61 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF144AP50876 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF144AP50876 MIR3687-1-201ENST00000614492 61 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 SPTSSB-204ENST00000617024 1292 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AC055717.3-201ENST00000622967 595 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 AC008267.7-201ENST00000624570 1194 ntBASIC14.92□□□□□ -0.02
RNF144AP50876 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RNF144AP50876 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.92□□□□□ -0.02
RNF144AP50876 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.92□□□□□ -0.02
RNF144AP50876 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms