Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRIM2P49643 AC112191.1-201ENST00000523689 701 ntBASIC15.31■□□□□ 0.04
PRIM2P49643 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PRIM2P49643 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PRIM2P49643 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 AC092384.3-202ENST00000564646 2873 ntBASIC15.31■□□□□ 0.04
PRIM2P49643 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.31■□□□□ 0.04
PRIM2P49643 AC092919.2-201ENST00000623631 1645 ntBASIC15.31■□□□□ 0.04
PRIM2P49643 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRIM2P49643 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
PRIM2P49643 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PRIM2P49643 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.31■□□□□ 0.04
PRIM2P49643 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRIM2P49643 AP002414.2-201ENST00000591780 3365 ntBASIC15.3■□□□□ 0.04
PRIM2P49643 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 WASH6P-202ENST00000359512 1437 ntBASIC15.3■□□□□ 0.04
PRIM2P49643 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRIM2P49643 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.3■□□□□ 0.04
PRIM2P49643 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.3■□□□□ 0.04
PRIM2P49643 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRIM2P49643 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.3■□□□□ 0.04
PRIM2P49643 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PRIM2P49643 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.3■□□□□ 0.04
PRIM2P49643 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.3■□□□□ 0.04
PRIM2P49643 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.3■□□□□ 0.04
PRIM2P49643 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 OR2I1P-210ENST00000642037 4691 ntBASIC15.3■□□□□ 0.04
PRIM2P49643 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.3■□□□□ 0.04
PRIM2P49643 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PRIM2P49643 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRIM2P49643 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PRIM2P49643 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRIM2P49643 DBET-201ENST00000630918 3363 ntBASIC15.29■□□□□ 0.04
PRIM2P49643 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRIM2P49643 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.29■□□□□ 0.04
PRIM2P49643 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRIM2P49643 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRIM2P49643 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRIM2P49643 AC093724.1-201ENST00000448659 1027 ntBASIC15.29■□□□□ 0.04
PRIM2P49643 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 AL513190.1-201ENST00000621254 727 ntBASIC15.29■□□□□ 0.04
PRIM2P49643 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
PRIM2P49643 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.29■□□□□ 0.04
PRIM2P49643 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.29■□□□□ 0.04
PRIM2P49643 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms