Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 TARDBPP1-201ENST00000442013 1203 ntBASIC16.9■□□□□ 0.3
PTPN1P18031 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN1P18031 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN1P18031 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN1P18031 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN1P18031 SPDYE18-201ENST00000510091 1050 ntBASIC16.9■□□□□ 0.3
PTPN1P18031 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN1P18031 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN1P18031 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN1P18031 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN1P18031 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN1P18031 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN1P18031 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PTPN1P18031 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PTPN1P18031 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTPN1P18031 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 AC024909.3-201ENST00000611513 2257 ntBASIC16.9■□□□□ 0.3
PTPN1P18031 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTPN1P18031 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PTPN1P18031 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN1P18031 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN1P18031 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
PTPN1P18031 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.89■□□□□ 0.3
PTPN1P18031 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN1P18031 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 AC112504.1-201ENST00000623415 1841 ntBASIC16.89■□□□□ 0.29
PTPN1P18031 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN1P18031 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
PTPN1P18031 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN1P18031 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.89■□□□□ 0.29
PTPN1P18031 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN1P18031 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.89■□□□□ 0.29
PTPN1P18031 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN1P18031 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.89■□□□□ 0.29
PTPN1P18031 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN1P18031 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.89■□□□□ 0.29
PTPN1P18031 AC104794.3-201ENST00000566840 1248 ntBASIC16.89■□□□□ 0.29
PTPN1P18031 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.89■□□□□ 0.29
PTPN1P18031 SRD5A3P1-201ENST00000603021 949 ntBASIC16.89■□□□□ 0.29
PTPN1P18031 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.89■□□□□ 0.29
PTPN1P18031 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN1P18031 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN1P18031 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN1P18031 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTPN1P18031 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN1P18031 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN1P18031 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PTPN1P18031 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN1P18031 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN1P18031 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PTPN1P18031 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN1P18031 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN1P18031 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 AL513523.2-202ENST00000427283 2040 ntBASIC16.88■□□□□ 0.29
PTPN1P18031 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN1P18031 GNAQP1-201ENST00000444815 1067 ntBASIC16.88■□□□□ 0.29
PTPN1P18031 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN1P18031 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN1P18031 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.88■□□□□ 0.29
PTPN1P18031 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN1P18031 HNRNPUP1-201ENST00000554987 333 ntBASIC16.88■□□□□ 0.29
PTPN1P18031 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.88■□□□□ 0.29
PTPN1P18031 AC004233.3-201ENST00000607794 1269 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms