Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRKCAP17252 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.9□□□□□ -0.02
PRKCAP17252 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 KRT8P48-201ENST00000515599 1220 ntBASIC14.9□□□□□ -0.02
PRKCAP17252 AC243562.1-201ENST00000560672 389 ntBASIC14.9□□□□□ -0.02
PRKCAP17252 AL138918.1-201ENST00000568306 659 ntBASIC14.9□□□□□ -0.02
PRKCAP17252 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.9□□□□□ -0.02
PRKCAP17252 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKCAP17252 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
PRKCAP17252 AL359258.3-201ENST00000622910 2331 ntBASIC14.9□□□□□ -0.02
PRKCAP17252 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
PRKCAP17252 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKCAP17252 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCAP17252 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKCAP17252 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
PRKCAP17252 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKCAP17252 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRKCAP17252 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 MTHFR-217ENST00000641820 1569 ntBASIC14.9□□□□□ -0.02
PRKCAP17252 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCAP17252 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 REXO1L8P-201ENST00000604378 1897 ntBASIC14.89□□□□□ -0.03
PRKCAP17252 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 U82695.1-201ENST00000635752 1889 ntBASIC14.89□□□□□ -0.03
PRKCAP17252 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PRKCAP17252 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.89□□□□□ -0.03
PRKCAP17252 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
PRKCAP17252 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
PRKCAP17252 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.89□□□□□ -0.03
PRKCAP17252 TIMM8BP1-201ENST00000452384 211 ntBASIC14.89□□□□□ -0.03
PRKCAP17252 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.89□□□□□ -0.03
PRKCAP17252 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.89□□□□□ -0.03
PRKCAP17252 AC079140.1-201ENST00000508039 487 ntBASIC14.89□□□□□ -0.03
PRKCAP17252 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.89□□□□□ -0.03
PRKCAP17252 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 AC008267.7-201ENST00000624570 1194 ntBASIC14.89□□□□□ -0.03
PRKCAP17252 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.89□□□□□ -0.03
PRKCAP17252 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.89□□□□□ -0.03
PRKCAP17252 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRKCAP17252 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.88□□□□□ -0.03
PRKCAP17252 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRKCAP17252 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRKCAP17252 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRKCAP17252 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRKCAP17252 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRKCAP17252 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PRKCAP17252 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.88□□□□□ -0.03
PRKCAP17252 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PRKCAP17252 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRKCAP17252 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.88□□□□□ -0.03
PRKCAP17252 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms