Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 CDK7-214ENST00000626796 358 ntTSL 5 BASIC26.69■■□□□ 1.86
CFTRP13569 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC26.69■■□□□ 1.86
CFTRP13569 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC26.69■■□□□ 1.86
CFTRP13569 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC26.69■■□□□ 1.86
CFTRP13569 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC26.69■■□□□ 1.86
CFTRP13569 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFTRP13569 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFTRP13569 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFTRP13569 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CFTRP13569 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC26.69■■□□□ 1.86
CFTRP13569 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC26.69■■□□□ 1.86
CFTRP13569 AC022188.1-201ENST00000620960 1664 ntBASIC26.69■■□□□ 1.86
CFTRP13569 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFTRP13569 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC26.68■■□□□ 1.86
CFTRP13569 AL645937.2-201ENST00000396808 931 ntBASIC26.68■■□□□ 1.86
CFTRP13569 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 MARK2P5-201ENST00000507649 634 ntBASIC26.68■■□□□ 1.86
CFTRP13569 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC26.68■■□□□ 1.86
CFTRP13569 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC26.68■■□□□ 1.86
CFTRP13569 SYT17-208ENST00000568433 812 ntTSL 3 BASIC26.68■■□□□ 1.86
CFTRP13569 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CFTRP13569 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 RPS15-201ENST00000233609 534 ntTSL 2 BASIC26.68■■□□□ 1.86
CFTRP13569 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 NPPA-201ENST00000376476 728 ntTSL 3 BASIC26.68■■□□□ 1.86
CFTRP13569 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
CFTRP13569 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC26.68■■□□□ 1.86
CFTRP13569 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC26.68■■□□□ 1.86
CFTRP13569 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC26.68■■□□□ 1.86
CFTRP13569 AL596276.2-201ENST00000447525 331 ntBASIC26.68■■□□□ 1.86
CFTRP13569 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 RPS15-205ENST00000586686 562 ntTSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 RPS15-208ENST00000591804 711 ntTSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC26.68■■□□□ 1.86
CFTRP13569 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFTRP13569 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC26.68■■□□□ 1.86
CFTRP13569 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC26.67■■□□□ 1.86
CFTRP13569 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC26.67■■□□□ 1.86
CFTRP13569 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC26.67■■□□□ 1.86
CFTRP13569 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC26.67■■□□□ 1.86
CFTRP13569 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 KRT8P29-201ENST00000420409 1371 ntBASIC26.67■■□□□ 1.86
CFTRP13569 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 CEP164P1-201ENST00000455142 418 ntBASIC26.67■■□□□ 1.86
CFTRP13569 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC26.67■■□□□ 1.86
CFTRP13569 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CFTRP13569 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC26.67■■□□□ 1.86
CFTRP13569 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFTRP13569 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC26.66■■□□□ 1.86
CFTRP13569 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC26.66■■□□□ 1.86
CFTRP13569 LRRC59-203ENST00000576448 1531 ntBASIC26.66■■□□□ 1.86
CFTRP13569 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC26.66■■□□□ 1.86
CFTRP13569 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CFTRP13569 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC26.66■■□□□ 1.86
CFTRP13569 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CFTRP13569 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CFTRP13569 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CFTRP13569 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CFTRP13569 AC011742.3-201ENST00000439053 820 ntBASIC26.66■■□□□ 1.86
CFTRP13569 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC26.66■■□□□ 1.86
CFTRP13569 AC005740.2-201ENST00000511085 419 ntBASIC26.66■■□□□ 1.86
CFTRP13569 AC116345.2-201ENST00000512837 523 ntBASIC26.66■■□□□ 1.86
CFTRP13569 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CFTRP13569 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC26.66■■□□□ 1.86
CFTRP13569 AL023803.2-201ENST00000620080 638 ntBASIC26.66■■□□□ 1.86
CFTRP13569 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC26.66■■□□□ 1.86
CFTRP13569 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC26.66■■□□□ 1.86
CFTRP13569 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CFTRP13569 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC26.65■■□□□ 1.86
CFTRP13569 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC26.65■■□□□ 1.86
CFTRP13569 SLC16A6P1-201ENST00000413214 1059 ntBASIC26.65■■□□□ 1.86
CFTRP13569 PDIA3P2-201ENST00000428073 158 ntBASIC26.65■■□□□ 1.86
CFTRP13569 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC26.65■■□□□ 1.86
CFTRP13569 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC26.65■■□□□ 1.86
CFTRP13569 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
CFTRP13569 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms